Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1419 ATGGCACATTCTCCAGACAAGATAAAGAACATCGATGGCTCAAAAGAAACTCTTAAACTTGCTGTGAGGATCACTGATCTATGGTTTATTGGGATGCCTAACAAATCTGAGCAAGCTGAGATGGGTGATGAGATCCATGTTGTTTGTAAACAAGACCAACTGAAGTCTAGGAAGATGGACTTGAAGGAAAATTGCAGTGGATTTGCGGATGTTGTGGCTGGCCAGTTTGAACCAGGCCTATTGGTTGATGTTATTGGTGTTGTGGAGGAGGTTGTCTTTCACCATGTTTCAGGAAAAGGTAGAAGGGTAGTCTTTAAACTAAAGGACTTGAGCCAACAATTTTTATCTTGCACTTTGTGGGACGATTATTGCTTGCAGTTTTTAAAATTCTTAGATGATCATGAAGGTCATGGCCCAATTACAGTTCTATTGACCCATGGTAGAATAAAGGAAGCTCAGGGATCTTATCCGCCATCGGTCAACAATTCTTTCAAGGCTTCAAAGTTAGTTATTAACCAACCTGTGATGGAGATTCAAGAATTCAATGAATGGCTTGTAGAGTTGGGCACTCAGGCCCGGTCAGTTTTTAAATTCCATGGTGAAGGCAGTTCACAAGTTTCAGGTTCTATCCAATTATCATCAAAGGAATCATTCTTTGGAAAGGTTAAGGAAGTTGTTTGTGTAACTGTTGGCACAATTACTAGGATTGTTATGGACAATCATTCATGGTGTTATACAACTTGCATTCAGTGCCATAAAAAAAGTGATGCAGAGATGGCGCCCTTCACATGTGCATGTGGCAAATACAATAAGGAAGTTGTGCTTAGGTATAGGCTTGAGGTGATGATCAACCACAGAGATGAAAGCACAAAATTCCTGCTTTGGGACTGTGAATGCACTGAATTAATTGTTCAATCAGCTGATGCAGTTAATAGGCTTAAAATTGAAGATGGTGATGTTGATTTAAATGCTTCACCCGAAGCACTTGATAAGTTGTTGGGTTATGTACTTGCTTTTAAGATAAAGGTGCAACCCAAGTTCAGGAATTCTACTGTTTTGAAATGTTCAACTGACTCAAGCTTAATAAATGCTGTGATGGATATGCTAGCTGATGCTGAGCAATCCATGTCTGTGACAGCAGACCATGATCCACTGTTTAGGCTCCCATTGACACCTACAAAGCGGCAGGCATTTCAAGATTGTGATGATGAAGCAGGGAGCTCTCAAATTTCACCTGCATAG 1242 0.4042 MAHSPDKIKNIDGSKETLKLAVRITDLWFIGMPNKSEQAEMGDEIHVVCKQDQLKSRKMDLKENCSGFADVVAGQFEPGLLVDVIGVVEEVVFHHVSGKGRRVVFKLKDLSQQFLSCTLWDDYCLQFLKFLDDHEGHGPITVLLTHGRIKEAQGSYPPSVNNSFKASKLVINQPVMEIQEFNEWLVELGTQARSVFKFHGEGSSQVSGSIQLSSKESFFGKVKEVVCVTVGTITRIVMDNHSWCYTTCIQCHKKSDAEMAPFTCACGKYNKEVVLRYRLEVMINHRDESTKFLLWDCECTELIVQSADAVNRLKIEDGDVDLNASPEALDKLLGYVLAFKIKVQPKFRNSTVLKCSTDSSLINAVMDMLADAEQSMSVTADHDPLFRLPLTPTKRQAFQDCDDEAGSSQISPA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1419 413 Gene3D - 198 367 IPR012340 -
Gso7g1419 413 SUPERFAMILY Nucleic acid-binding proteins 76 185 IPR012340 -
Gso7g1419 413 Gene3D - 61 195 IPR012340 -
Gso7g1419 413 CDD RPA1_DBD_B_like 98 182 - -
Gso7g1419 413 PANTHER REPLICATION FACTOR A 1, RFA1 51 297 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso7g1419 413 SUPERFAMILY Nucleic acid-binding proteins 218 350 IPR012340 -
Gso7g1419 413 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 51 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1419 Gso-Chr7 28999339 29001704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1419 81 321 Core DNA Replication Machinery Family AT5G08020 25.194 1.46e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1419 - - gmx:102660369 814.683