Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1416 ATGACCAAACCCAACACTTTCTTTCACAATCTAATCAAGCCCTTCAAATTCAGCTCCAGCAAAGAGGGACAAACCGAAGAAAACGAAATACAGAACTTAGCTGCACAGGAGCAGAAGATCTTCCCCTACGAAACATTGGTTGCTGCTACCAACAAATTTCATATTCTTAACAAGCTAGGTGAAGGAGGATTTGGACCCGTCTATAAGGGGAAATTGAATGATGGGAGAGAGATTGCGGTGAAGAAGTTATCGCATAGATCGAATCAAGGGAAGACGCAGTTCGTCAACGAGGCAAAGTTGTTGGCACGTGTGCAGCACCGTAATGTGGTGAATTTGTTTGGTTATTGTACCCATGGCTCCGAAAAGCTTCTTGTTTACGAGTATGTCCGTCGCGAGAGCCTCGACAAGCTTCTCTTCAAATCCCAGAAGAAAGAGCAGCTAGATTGGAAACGTAGGTTTGACATAATCACTGGGGTGGCAAGAGGGTTGCTTTATCTACACGAAGACTCTCACAACTGCATTATACATCGCGACATAAAGGCAAGTAACATCTTACTGGATGAAAAATGGGTCCCCAAGATTGCAGATTTTGGCCTCGCACGCCTCTTCCCCGAAGACCAAACCCATGTCAACACCCGTGTGGCTGGAACCAATGGCTATTTGGCTCCGGAGTATTTAATGCATGGACATTTATCCGTGAAAGCAGACGTATTTAGCTATGGGGTTTTGGTGTTGGAATTGGTCAGTGGCCTGAGAAATTCATCGTTTGATATGGACGTTAGTGCACAGAATCTCCTGGACTGGGCATACAGGCTATACAAGAAAGGGAGGGCATTAGAAATCGTGGACCCAACATTGGCCTCCACAGCGGTAACAGAACAAGCAGAAATGTGCATTCAACTGGGTCTACTCTGCACACAAGGTGATCTAAACCTACGTCCTACGATGGGGCGTGTGATTGTGGTGTTGTCAAAGAAACCGCCAGGCCACATGGAAGAACCAACAAGACCAGGAATACCCGGTTCCAGATACAGAAGAGTATCACGCAGACCCTATGCAATGTCTTCTGGGGAAGTTGATGATGACTCTAATTTGCACACTTTTGATTCTTCAAGAAATTGTGGCACTAACACTACCACTTCTGCAACAACACCAACAACAAGCTCCAATACTACAGCTGAAGTAGACCGGCGAGGGAAACGACCGATGCAACGTTTGGTGTTGCGTGATTAG 1233 0.4607 MTKPNTFFHNLIKPFKFSSSKEGQTEENEIQNLAAQEQKIFPYETLVAATNKFHILNKLGEGGFGPVYKGKLNDGREIAVKKLSHRSNQGKTQFVNEAKLLARVQHRNVVNLFGYCTHGSEKLLVYEYVRRESLDKLLFKSQKKEQLDWKRRFDIITGVARGLLYLHEDSHNCIIHRDIKASNILLDEKWVPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMHGHLSVKADVFSYGVLVLELVSGLRNSSFDMDVSAQNLLDWAYRLYKKGRALEIVDPTLASTAVTEQAEMCIQLGLLCTQGDLNLRPTMGRVIVVLSKKPPGHMEEPTRPGIPGSRYRRVSRRPYAMSSGEVDDDSNLHTFDSSRNCGTNTTTSATTPTTSSNTTAEVDRRGKRPMQRLVLRD* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1416 410 MobiDBLite consensus disorder prediction 327 346 - -
Gso7g1416 410 MobiDBLite consensus disorder prediction 354 410 - -
Gso7g1416 410 MobiDBLite consensus disorder prediction 368 393 - -
Gso7g1416 410 ProSiteProfiles Protein kinase domain profile. 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1416 410 PANTHER RECEPTOR-LIKE KINASE 3 378 - -
Gso7g1416 410 SUPERFAMILY Protein kinase-like (PK-like) 38 328 IPR011009 -
Gso7g1416 410 SMART serkin_6 53 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1416 410 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 378 - -
Gso7g1416 410 CDD STKc_IRAK 59 325 - -
Gso7g1416 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Gso7g1416 410 MobiDBLite consensus disorder prediction 394 410 - -
Gso7g1416 410 Pfam Protein kinase domain 53 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1416 410 Gene3D Phosphorylase Kinase; domain 1 15 128 - -
Gso7g1416 410 Gene3D Transferase(Phosphotransferase) domain 1 130 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1416 Gso-Chr7 28472076 28480593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1416 25 339 Receptor kinase-like Gene Family AT4G11530 49.842 1.63e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso7g1416 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1416 - - gmx:100811523 809.675