LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1387	ATGGCTTACCCTTGTTCTAACAAGGCCTTAGGTTGCTACCTCTTATTTTCCATTGTTATATCTTTCTTTTCAACCTTTTCTCGTGCTCATTTTGATCATGGATTTATCCATATTGAACCAATAATATTCCCAAACGTTGATGCTTATGCACCCACACTTGAATTTGATACTATTGCACCAACTCCAAAAATTGAAGATGATTCACAACTTGCTCCACCACCCGAAGTTGGTGCCATTCCACCAACTTTTGAAGTTCAAAATGATGCACCACTTGTAAATGAAAGGCTAAAAAAGGCCTATGTTGCTCTTCAAGCATGGAAAGAGGCTATTTACTCTGACCCTTTGAACACAACTGGTAATTGGGTTGGTGAAGATGTCTGCTCCTACAATGGTGTGTTTTGTGCTCCCGCCATTGATGATCCCACATTGAATGTGGTTGCTGGTGTTGATCTCAACAATGCGGACATTGCTGGTCACCTCCCAGAAGAGTTAGGCAACTTGTCAGATATTGCACTTTTCCACATTAACTCCAATAGATTTTGTGGAATTGTGCCAGAGACCTTGGAAAATCTCACACTTCTTCATGAGTTTGACATTAGCAACAATCACTTTGTTGGTGGTTTTCCATCTGTGGTTCTCAAATGGCCAAACTTGAAGTACTTGGATATCAGATACAATGACTTTGAAGGACCCTTACCTCCAGAGCTATTTGAGAAGGATCTTGATGCAATATTTTTGAACAATAATCGTTTCACGTCTATCATCCCAGACACTCTAGGAAAATCCAAGGTCTCAGTTGTGACCTTTGCTAACAACAAATTCACGGGTTGTATTCCAAAGTCTATTGTGAACATGAAAAACATGAATGAGATTGTGTTCATGGGCAATGACCTTGGAGGTTGCTTGCCACAAGAGATTGGATTGTTGGAAAGCATAACTGTTTTAGATGCTAGTCATAATGGTTTTGTAGGGACTCTTCCTAACTTGTCAGGACTGAAGAATGTTGAGGTCATAGACATTGAACACAACAAGCTTAGTGGATATGTGTCTAACATTGTTTGCCAACTTCCTTTGCTGAAGAACTTCACATTCTCTAACAACTACTTCAATGGGGAAGCTCAAACTTGTGTGCCTTCATCTAATTCATTGGTGGCTTTGGATGACTCAAAAAATTGTTTATCAGGAAGGAAGAATCAAAAGTCATCTAAGCAATGTTTGTCGGTGCTAACTCGCCCTGTGGATTGTAGCAAACATTGTGGTGGAGGCAAAGGTAATGACAATGGTAATAGCAATAGCCATGTCCCCTCAACACCAAAGCCAACACCATCACCTTCACCTATCCCAGAGCCACCCAAGTCTGACCCTCCTAGGCCTGAGATATCAAAGGTTCAACCACCCCTAACTCCAGAGGTCAAGCCACCCCCAACACCAAAGGCTCAACCACCCCCAACACCAAAGGTTGTACACTCACCACCACCTCATATGTCCTCCCCACCTCCCCCTGTTCACTATCCTTCACCACCTCTTATGTCCTCACCACCTCCACCAGTCTACTCCCCACCACCAGTTAACTCACCACCACCCCATGTGTCTTCACCACCTCCACCAACCCCTATGTCCTCACCACCTCCACCAATCTACTCCCCACCACCTTTTGTGTCCTCACCACTTCCACCAGTTAACTCCCCACCACCCTCTATGTCCTCACCACTTCAACCAGTCAACTTCCCATCACCACCCCATGTATCCTCACCACCTCCACTAGTCCACACCCCACCACCACCACCAGTTAACTCTCCATTACCCCTCGTGTCCTCACCACCTCCACCAATCTACTCTCCACCACCACCACCAATCAACTCTCCTCCTCCACCAACACTTATTCTCTCTCCATCTGCCCTAGTACATTCTCCACCACCACCTATTCACTCACCCCCTCCACCAATTTACTCTCCACCACCACCAGTTAACTCCCCACCACCCCCCGTGTCCTCACCACCTCCACCAGTCTATTCTCCACCACCACCACCAATCAATTCTCCTCCTCCACCAACACCTGTTCTCTCTCCATCTCCCTTAGTACATTCTCCACCATCACCTGTCCACTCACCTCCTCCACCAATTTACTCTCCACCACCACTAGTTAACTCCCCACCACCCCCCGTGTCCTCACCACCTCCACCAGTCTACTCTCCACCACCACTACCAATCAATTCTCCTCCTCCACCAACACCTGTTCTCTCTCCATCTCCCCTAATACATTCTCCACCACCACCTGTCCACTCACCTCCTCCACCAATTTACTCTCCACCACCACCAGTTAACTCCCCACCACCCCCCGTGTCCTCACCACCTCCACCTGTCTACTCTCCACCACCATCACCAATCAATTCTCCTCCTCCACCAACACCTGTTCTCTCTCCATCTCCCCTAATACATTCTCCACCACCACCTGTCCACTCACCTCCTCCACCAATTTACTCTCCACCACCACCAGTTAACTCCCCACCACCCCCCGTGTCCTCACCGCCTCCACCAGTCTACTCTCCACCACCACCACTAATCAACTCTCCTCCTCCACCAACACTTGTTCTCTCCCCATCTCCCCCAATACATTCTCCACCACCACCTGTTCACTCACCTCCTCCACCAGTTTACTCTCCACCACCACCAGTTTACTCTCCACCACCAACATGGGATGATGTTGTCCTCCCACCCCACTTTGGATCTTCATACCAGTCACCTCCTCCACCAACAATTGCTGGCTACTAA	2772	0.4762	MAYPCSNKALGCYLLFSIVISFFSTFSRAHFDHGFIHIEPIIFPNVDAYAPTLEFDTIAPTPKIEDDSQLAPPPEVGAIPPTFEVQNDAPLVNERLKKAYVALQAWKEAIYSDPLNTTGNWVGEDVCSYNGVFCAPAIDDPTLNVVAGVDLNNADIAGHLPEELGNLSDIALFHINSNRFCGIVPETLENLTLLHEFDISNNHFVGGFPSVVLKWPNLKYLDIRYNDFEGPLPPELFEKDLDAIFLNNNRFTSIIPDTLGKSKVSVVTFANNKFTGCIPKSIVNMKNMNEIVFMGNDLGGCLPQEIGLLESITVLDASHNGFVGTLPNLSGLKNVEVIDIEHNKLSGYVSNIVCQLPLLKNFTFSNNYFNGEAQTCVPSSNSLVALDDSKNCLSGRKNQKSSKQCLSVLTRPVDCSKHCGGGKGNDNGNSNSHVPSTPKPTPSPSPIPEPPKSDPPRPEISKVQPPLTPEVKPPPTPKAQPPPTPKVVHSPPPHMSSPPPPVHYPSPPLMSSPPPPVYSPPPVNSPPPHVSSPPPPTPMSSPPPPIYSPPPFVSSPLPPVNSPPPSMSSPLQPVNFPSPPHVSSPPPLVHTPPPPPVNSPLPLVSSPPPPIYSPPPPPINSPPPPTLILSPSALVHSPPPPIHSPPPPIYSPPPPVNSPPPPVSSPPPPVYSPPPPPINSPPPPTPVLSPSPLVHSPPSPVHSPPPPIYSPPPLVNSPPPPVSSPPPPVYSPPPLPINSPPPPTPVLSPSPLIHSPPPPVHSPPPPIYSPPPPVNSPPPPVSSPPPPVYSPPPSPINSPPPPTPVLSPSPLIHSPPPPVHSPPPPIYSPPPPVNSPPPPVSSPPPPVYSPPPPLINSPPPPTLVLSPSPPIHSPPPPVHSPPPPVYSPPPPVYSPPPTWDDVVLPPHFGSSYQSPPPPTIAGY*	924

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1387	923	SUPERFAMILY	L domain-like	101	395	-	-
	Gso7g1387	923	Gene3D	Ribonuclease Inhibitor	97	263	IPR032675	-
	Gso7g1387	923	Gene3D	Ribonuclease Inhibitor	264	411	IPR032675	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	618	708	-	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	821	920	-	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	73	433	-	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	698	819	-	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	572	663	-	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	762	840	-	-
	Gso7g1387	923	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	648	760	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	648	760	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	698	819	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	572	663	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	618	708	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	762	840	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	73	433	-	-
	Gso7g1387	923	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	821	920	-	-
	Gso7g1387	923	MobiDBLite	consensus disorder prediction	417	923	-	-
	Gso7g1387	923	MobiDBLite	consensus disorder prediction	437	902	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1387	Gso-Chr7	22063056	22065979	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1387	76	417	Trihelix Transcription Factor Family	AT1G49490	66.181	1.26e-171	519

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1387	-		-	gsj:114419228	911.753