Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1349 ATGGAAGAAGTATGGCAAAAACAAATGAGGTATGTACAGTCTAGCCTCTCTATTGCCAAGAAGAGCCTTGCTATGGATGATTCTGAAAGAAATTCAAATGCTTCTATTAATGCAAGTGATGACAGGGATTTCAGCTGGGATGTAGGAACCAATCACCAACGCCAAGAAAGCAATGGGGCAAGATTAATGAGTGCTACTTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTGTTTGGTGATGATGCAAAGTTCTTGGTAGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAAACAGAGAAGTCAAGTTTGAGCAAGTTGAGTCAAGTTGCGAAGGTGATAGGGGAGCATCTCATGTTGAGCTACATTGGCCTGCTCGTTTGAATATTGTACGAGGAATCGTGCAAGGAATGCATTATCTTTACACAGTACTTGGTTCCTCGGATCTTCCACACGAGTATCTCAAGTCCAGCAATGTTCTCCTTGGACTAGACAATGAACCAATACTTGTAGATTACGGGTTCAGCCACATGGTTAACCCTTCAACCATTGCACAAACACTATTCGCTTACAAGGCACCAGAGGCAGCACAACAAGGCCAGGTTTCGCGCAGTTGCACTATTTACTGTCTTGGTGTTGTCATAATTGAGATACTGACAGGGAGGTTCCCTTCTCAGTATCTTAGCAATGGAAAGGGTGGGGCTGATGTGGTGCAATGGGTGGAAACTGCAATCTCTGAGGGAAGGGAATCAGAAGTGCTTGATCTTGAGATTGCAGGCTCTAGGAATTGGCTTGGTGAGAAGGAGTAA 831 0.4404 MEEVWQKQMRYVQSSLSIAKKSLAMDDSERNSNASINASDDRDFSWDVGTNHQRQESNGARLMSATLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPNREVKFEQVESSCEGDRGASHVELHWPARLNIVRGIVQGMHYLYTVLGSSDLPHEYLKSSNVLLGLDNEPILVDYGFSHMVNPSTIAQTLFAYKAPEAAQQGQVSRSCTIYCLGVVIIEILTGRFPSQYLSNGKGGADVVQWVETAISEGRESEVLDLEIAGSRNWLGEKE* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1349 276 Pfam Protein kinase domain 136 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1349 276 ProSiteProfiles Protein kinase domain profile. 1 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1349 276 Gene3D Transferase(Phosphotransferase) domain 1 117 273 - -
Gso7g1349 276 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 119 274 - -
Gso7g1349 276 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 119 274 - -
Gso7g1349 276 SUPERFAMILY Protein kinase-like (PK-like) 125 246 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1349 Gso-Chr7 19991966 19999788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1349 120 268 Receptor kinase-like Gene Family AT5G20690 53.020 1.63e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso7g1349 Pkinase 1.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1349 - - gmx:102660294 548.895