Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1341 ATGGGGATGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAGGGGCCTTCTCGCATAAGTGCCACCACGATTATATTCTATACATTGACTCTTGTCATGCTTGTGTTTATCCTGTTTGTAACATACAGACATTGGTCCAACAGGACAAGACTTCAACAAGAGAGATACATATCAGTCTCCGAGGATGAAAATACATCTGTAGAATCCAAAAAATCTGATCTACCTGGATATGCTGTTGTAATTACCTCTAAAGGTTCTATTATAGTAGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATAGATTTATGTCAAAAAGGGCACTTCAAGGGAATGCTTTTTCACCAAGTAATTAAGCACTATGTGATTCAGGGGCCTGGAGCTACTGAAGATTGGAACCTGTTAGGAAAAAAATATGCAAGTATGAGACATGAAGCATTCATGCTTGGAACATCAAAGGGAAAATACTTTAACAAAGTATTTGATCTTTTCATCACAACTGCACCAATACCAGATCTAAATGAAAAGCTTATTGTGTTTGGCCGAGTCATCAAGGGACAGGATATTGTTCAGGAAATTGAAGAAGTGGATACAGATGAGCATTACCAACCAAAAGTTTCCATTGGGATACTTGATGTGGCTCTTAAACAGCTGGAGTGA 678 0.3864 MGMIKPQALLQQSKRKKGPSRISATTIIFYTLTLVMLVFILFVTYRHWSNRTRLQQERYISVSEDENTSVESKKSDLPGYAVVITSKGSIIVELYKESAPEVVDEFIDLCQKGHFKGMLFHQVIKHYVIQGPGATEDWNLLGKKYASMRHEAFMLGTSKGKYFNKVFDLFITTAPIPDLNEKLIVFGRVIKGQDIVQEIEEVDTDEHYQPKVSIGILDVALKQLE* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1341 225 SUPERFAMILY Cyclophilin-like 78 220 IPR029000 -
Gso7g1341 225 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 224 - -
Gso7g1341 225 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 219 IPR002130 GO:0000413|GO:0003755
Gso7g1341 225 Gene3D - 64 224 IPR029000 -
Gso7g1341 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Gso7g1341 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Gso7g1341 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 168 180 IPR002130 GO:0000413|GO:0003755
Gso7g1341 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 181 196 IPR002130 GO:0000413|GO:0003755
Gso7g1341 225 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 224 - -
Gso7g1341 225 CDD cyclophilin 85 218 - -
Gso7g1341 225 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 221 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1341 Gso-Chr7 19611482 19617110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1341 79 221 U-box Gene Family AT5G67530 27.273 2.17e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1341 - - gmx:100797505 447.973