Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1326 ATGACCGTTACTTTTTTCATCTTTCTTCTCTACTTCTTTTTTCATCCCGCCGTTTCTCTCTCCTCCGACGGCATCGCGCTTCTCACTCTGAAGTCCGCCGTGGACGCCCCCGGCGCTGCCGCGTTCTCCGACTGGAACGACGCCGACGCCACGCCGTGCCGGTGGTCCGGCGTCACGTGCGCGAACATCTCCGGGCTCCCGGAGCCGCGTGTCGTCGGCCTGGCGCTCTCCGGCAAGGGCCTCCGCGGCTACCTCCCGTCGGAGCTCGGCACCCTCCTCTACCTCCGCCGCCTCAACCTCCACACCAACGCCCTCCGCGGCGCCATCCCGGCGCAGCTCTTCAATGCCACCGCGCTCCACAGTGTCTTCCTCCACGGCAACAACCTCTCCGGCAACCTCCCTCCCTCCGTCTGCACCCTCCCCCGCCTCGAAAACCTCGACCTCTCCGACAACGCCCTCTCCGGTGCCATCCCCGATACGCTCCGAAAATGCTCCAACCTCCAGCGGCTAATCCTCGCCCGGAACAAATTCTCCGGCGAGATTCCGGCGAGTCCGTGGCCGGAGCTGAAAAGCCTAGTCCAGCTCGATCTATCATCGAACCTTCTAGAAGGTTCGATCCCGGACAAGCTCGGTGAGCTCAAAACCCTAACCGGAACCCTCAACCTCTCTTTCAACCACTTGTCTGGTAAAATCCCTAAATCTCTAGGGAACTTGCCTGTTGCCGTGAGCTTCGATCTTCGGAACAATGATTTGAGCGGTGAGATTCCCCAAATGGGGTCTTTTTCGAACCAGGGCCCCACCGCTTTCCTCAACAACCCGAACCTGTGCGGGTTTCCTCTGCAGAAACCCTGCACAGGTTCGGCGCCGAGCGAACCGGGGCTCAGCCCTGGTTCACGAAGGCCGGCGCACCGGTCTGCGAAGGGACTTAGCCCTGGTTTGATTATTTTGATCTCGGTGGCGGATGCCGCCGGGGTGGCCTTGATTGGGCTTGTGGTGGTTTATGTTTATTGGAAGAGGAAGGGCAAGTCCAATGGGTGTAGTTGCAGTTTGAAGAGGAAGTTTGGTGGGGAGAGTGAGAAGTTGAGTTTGTGTTGTTGGTGTAATGGGGTGAAGAGTGATGATTCTGAGGTGGAGGAGGGGGAGAAGGAAGAGGGAGAGGGTGGGAGGGGGGAAGGAGACTTGGTGGCCATTGATAAGGGTTTCAACTTTGAGCTTGATGAGTTGTTGAGGGCTTCTGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGTGGTGCTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGATTGGGGGAAGGTGGAGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCCATTGGCAAAGTGAAGCATCCCAACATTGTGAAGTTGAGAGCATATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCCAATGGCAATTTGGCCACTGCCCTTAGAGGGAGAAATGGTCAACCATCCCCGAATCTTTCATGGTCAACCAGGCTGAAAATCATCAAAGGAGCAGCCAGGGGTTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACATTAAACCCTCCAACCTCCTTCTCGACACTGACTTCCAACCCCATATTTCTGATTTTGGCCTAAACAGACTGATCAGTATAACAGGCAACAACCCCTCCTCTGGTGGCTTTATGGGAGGATCTCTTCCTTACTTGAAGCCATCACAAACAGAGCGAACTAACAACTACAAAGCCCCTGAGGCGCGAGTTCCAGGTTGCAGACCCACTCAGAAGTGGGATGTGTATTCATTTGGAGTTGTATTACTTGAATTGCTTACTGGGAAGTCCCCGGATTCTTCTCTGGCTGCATCAACTTCCATGGAAGTCCCTGACTTGGTGAGATGGGTTAGGAAAGGGTTTGAACAAGAAAGTCCATTATCTGAAATTGTTGATCCGTCGATGCTCCATGAAGTGCATGCCAAAAAAGAGGTACTAGCTGCGTTTCATGTAGCACTACAATGCACTGAGGGAGACCCTGAAGTCAGGCCTAGAATGAAAACTGTCTCCGAAAATCTTGAAAGAATTGGATAA 2121 0.538 MTVTFFIFLLYFFFHPAVSLSSDGIALLTLKSAVDAPGAAAFSDWNDADATPCRWSGVTCANISGLPEPRVVGLALSGKGLRGYLPSELGTLLYLRRLNLHTNALRGAIPAQLFNATALHSVFLHGNNLSGNLPPSVCTLPRLENLDLSDNALSGAIPDTLRKCSNLQRLILARNKFSGEIPASPWPELKSLVQLDLSSNLLEGSIPDKLGELKTLTGTLNLSFNHLSGKIPKSLGNLPVAVSFDLRNNDLSGEIPQMGSFSNQGPTAFLNNPNLCGFPLQKPCTGSAPSEPGLSPGSRRPAHRSAKGLSPGLIILISVADAAGVALIGLVVVYVYWKRKGKSNGCSCSLKRKFGGESEKLSLCCWCNGVKSDDSEVEEGEKEEGEGGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLKIIKGAARGLAYLHECSPRKFVHGDIKPSNLLLDTDFQPHISDFGLNRLISITGNNPSSGGFMGGSLPYLKPSQTERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSLAASTSMEVPDLVRWVRKGFEQESPLSEIVDPSMLHEVHAKKEVLAAFHVALQCTEGDPEVRPRMKTVSENLERIG* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1326 706 PRINTS Leucine-rich repeat signature 143 156 - -
Gso7g1326 706 PRINTS Leucine-rich repeat signature 189 202 - -
Gso7g1326 706 SMART LRR_typ_2 140 163 IPR003591 -
Gso7g1326 706 SMART LRR_typ_2 189 213 IPR003591 -
Gso7g1326 706 SMART LRR_typ_2 92 116 IPR003591 -
Gso7g1326 706 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Gso7g1326 706 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 706 - -
Gso7g1326 706 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Gso7g1326 706 Gene3D Ribonuclease Inhibitor 20 185 IPR032675 -
Gso7g1326 706 Pfam Protein kinase domain 415 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1326 706 SUPERFAMILY Protein kinase-like (PK-like) 415 702 IPR011009 -
Gso7g1326 706 SUPERFAMILY L domain-like 21 281 - -
Gso7g1326 706 CDD STKc_IRAK 416 705 - -
Gso7g1326 706 Pfam Leucine rich repeat 141 202 IPR001611 GO:0005515
Gso7g1326 706 Gene3D Transferase(Phosphotransferase) domain 1 486 706 - -
Gso7g1326 706 Gene3D Phosphorylase Kinase; domain 1 398 485 - -
Gso7g1326 706 SMART serkin_6 414 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1326 706 ProSiteProfiles Protein kinase domain profile. 410 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1326 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Gso7g1326 706 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1326 Gso-Chr7 19286658 19291744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1326 16 705 Receptor kinase-like Gene Family AT1G67510 69.492 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso7g1326 Pkinase 7.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1326 - - gmx:100795021 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1666 18 48651254 48656381 Gso7g1326 7 19286658 19291744 GST
Gso7g1326 7 19286658 19291744 Gso1g1064 1 43701061 43706800 PCT