Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1309 ATGAGGATGGAAGAAGAGAGACATGGCTCGGAATGTTCAAAGACAAGCCCTTCTAACGAAGAAGGTTGTGAAGAAGAAAGTGAGGGCAATGAAGATGAAAGCAAGCCAAACAACAACAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGACCACAGTGAGGCCTTATGTTAGATCTAAGATGCCAAGGCTACGATGGACACCTGATCTTCATCTTCGCTTTATTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTAGTTCTTCAGTTGATGAACATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTAGACACAAATCAAGAAACTGGAGACAGAAATGTTTACAATCTTAGCCAACTTCCCATGCTTCAAGGCTATAATCCAAGCCAAAGTTCAGCATACAGATATGGATATGGGGATGCTTCTCTTGCTATCTATGAAAACATGGTGCATGGGCCTTTCATGAATAGAAGTTCCTTGGATGAATCTGGAGCTGAATTTTGTGGCAGCAGATTGACTCATGGGACCAATAGTAACATCAATTGGATTCATAATATGTTCCAAGTTGATTCTTCTTCTAGTTTTAATGAACCATCAACAAGCAAAGTTCATGAACCAAAACATAAGTTCTTCTCATTTGGTGGCAATGAATCCTCATCCACACAAATCAAAATGAGCCAGGTTGATCTACATCTATCAACTCAACCGCAGCCAAGTGCACAAGAACTCATGCCTAATAATAAGTTTACAACAAATGAGATGGAACTGAAGACCTTGAAAAGGAAGGCTTCAGATATTGACCTTGATTTGAATCTATCACTTAAGTTAAATTCAAGGGTCAGTGCTGAGAACCAAGGAAGCATGGTGGACCATGAAGTTGTTGATAGCAATCTATCACTCTCTTTGTGTTCTCAATCCTCCTCCTTTAGCAGCAGCAGGTTGAAAAAAGCACAAGATCATTCTAAGGAGCAAGGGGAAATTATTAGAGCCAGTACTCTGGATCTGACTATATGA 1074 0.405 MRMEEERHGSECSKTSPSNEEGCEEESEGNEDESKPNNNNGGSSSNSTVEENEKKTTVRPYVRSKMPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDTNQETGDRNVYNLSQLPMLQGYNPSQSSAYRYGYGDASLAIYENMVHGPFMNRSSLDESGAEFCGSRLTHGTNSNINWIHNMFQVDSSSSFNEPSTSKVHEPKHKFFSFGGNESSSTQIKMSQVDLHLSTQPQPSAQELMPNNKFTTNEMELKTLKRKASDIDLDLNLSLKLNSRVSAENQGSMVDHEVVDSNLSLSLCSQSSSFSSSRLKKAQDHSKEQGEIIRASTLDLTI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1309 357 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
Gso7g1309 357 PANTHER - 9 357 - -
Gso7g1309 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 357 IPR044848 GO:0003700
Gso7g1309 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Gso7g1309 357 MobiDBLite consensus disorder prediction 1 21 - -
Gso7g1309 357 MobiDBLite consensus disorder prediction 34 51 - -
Gso7g1309 357 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Gso7g1309 357 Gene3D - 66 123 - -
Gso7g1309 357 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 122 IPR006447 GO:0003677
Gso7g1309 357 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1309 Gso-Chr7 19006981 19009139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1309 58 130 G2-like Transcription Factor Family AT2G42660 75.342 4.62e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso7g1309 Myb_DNA-binding 7.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1309 - - gmx:102662997 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1653 18 48440754 48442974 Gso7g1309 7 19006981 19009139 GST