Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1299 ATGAAGACCCGTTTTCCCTCCACACGGGTCATCTTCGTGGCCTCGCTCTGTTTCCTCGCAAGCTTCGAATTATTGCAAGCCAAAACCATCGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGGGAAATTCAGAAGGCTTTTCACAAGCTATCTCTTCAGTATCACCCTGACAAGAACAAATCCAAGGGTGCACAAGAGAAGTTTTCTCAGATCAATAATGCATATGAGATTTTATCCGATGAAGAGAAGAGAAAGAATTATGACATGTATGGAGATGAGAAAGGAAACCCTGGATTTCAAGGTGGCCATCCTGGAGGTCAGGGTGGATATACTTTTACAGGGGGTGGTCCTGGACAAAGCCATTTTAACTTCAAACCAGGGGGTGACTGGCAAGGTATGGGCGGTCAGGGAGGATCTAAGTCATTCTCCTTTTCCTTTGGTCGTGGCTCAGGTGATTCCAATCCTTTTGGATTTGGCTTGGATGATCTTTTTGGCAGTTTTTTCGGTGGTGGAGGTGGTGGGAGTCAGTTTGGTGGTTTTGGCAGTTCAGCCAAGTCTCAATCTGGGTCCAAGAGTTCTTCCAAAAGTCTTAGAGCTGTAAATTCACAGATTTACAAGAAAGAAATAGAGAATGCAGGGATGACTTGGCTTTTGTTATCTTATATGCCCTCATCGATGGAGATCCAATACTTTGAATCCACTATAGAGGAGGTTGCAAGTTCGTTGCAGGGAGCTTTGAAGGTTGGAAGCATAAACTGTGAAAAGGAAGTCTCATTCTGTAAGGAGCTTAGCATATATCCACGCAGAGCTCCAAGGCTTATTGTTTTTTCTTACAAGGAGAATGAAAAAGGTTATTTGGTGGAGTATAGGGGAAACTTGGCTGCTAAGAATTTGAAGGCTTTCTGTCAAGAATATTTGCCAAGGTTTTCAAAACGAACTGACTTGAATCATCTTGATCAATTCAGCACTACTGGAAAGTTGCCTAGGGTGCTGCTTCTCTCCACCAAGAAGGACACTCCTGTAATTTGGCGTGTCCTTAGTGGCTTGTATCACAAACGCATTACTTTCATTGATGCAGAGGTTCATGATGTTTCTGATCCAAGAGTAAAAACGCTAGGAGTTGATGCACTTCCAGCTATTGTAGGTTGGCTACCAAATGGAGAAAAGCGTGTTCTAAAAACTGGGATATCTGTGAAAGATTTAAAATCTGCAGTTCTTGATCTTAGTAACATACTTGATAGTTTTGAAAAAGTAAGTAAAAAGGAATCATCAGGTCAGGCCAAGGAGGCACAAACTGACTCAGACGAGGGACGCGTACCATTACTTTCTAAATCAAACATCGAGGCTCTATGTGGTGAGAAAACTCCAGTCTGCATAATTGGTGCCTTCAGTTCTTCTAAAGCTAGAGAAAAGCTTGAATCAATCCTCTCTTTGGTTTCTCAAAAATCTTTGTCAAGACAACCAAATCAGGGATCCAGCAGCTCTAGGGACTCCATTTCCTATGCTCTCTTAGATGCTGCAAAGCAAAAATCATTTCTAAAGGCATTTGACAAAACAGGTTATAAATCATCAAATAATTTGTTGATTGCCTACAAACCTCGAAGAGGGAAGTATAGTATATTTATGGGTGAAATGACAATAGAGGAGATAGAGAATTTCATTAGCTCCGTTCTCAGTGGAGATGTACCCTTCAGAGAAGCAACACGGGGGAAGCCTGTACTAGAGTATTAG 1743 0.4205 MKTRFPSTRVIFVASLCFLASFELLQAKTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKSKGAQEKFSQINNAYEILSDEEKRKNYDMYGDEKGNPGFQGGHPGGQGGYTFTGGGPGQSHFNFKPGGDWQGMGGQGGSKSFSFSFGRGSGDSNPFGFGLDDLFGSFFGGGGGGSQFGGFGSSAKSQSGSKSSSKSLRAVNSQIYKKEIENAGMTWLLLSYMPSSMEIQYFESTIEEVASSLQGALKVGSINCEKEVSFCKELSIYPRRAPRLIVFSYKENEKGYLVEYRGNLAAKNLKAFCQEYLPRFSKRTDLNHLDQFSTTGKLPRVLLLSTKKDTPVIWRVLSGLYHKRITFIDAEVHDVSDPRVKTLGVDALPAIVGWLPNGEKRVLKTGISVKDLKSAVLDLSNILDSFEKVSKKESSGQAKEAQTDSDEGRVPLLSKSNIEALCGEKTPVCIIGAFSSSKAREKLESILSLVSQKSLSRQPNQGSSSSRDSISYALLDAAKQKSFLKAFDKTGYKSSNNLLIAYKPRRGKYSIFMGEMTIEEIENFISSVLSGDVPFREATRGKPVLEY* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1299 580 Gene3D DnaJ domain 28 183 IPR036869 -
Gso7g1299 580 SUPERFAMILY Thioredoxin-like 204 311 IPR036249 -
Gso7g1299 580 Gene3D Glutaredoxin 442 568 - -
Gso7g1299 580 CDD DnaJ 31 84 IPR001623 -
Gso7g1299 580 SUPERFAMILY Thioredoxin-like 442 567 IPR036249 -
Gso7g1299 580 Gene3D Glutaredoxin 201 310 - -
Gso7g1299 580 PANTHER DNAJ PROTEIN ERDJ3A 7 578 - -
Gso7g1299 580 ProSiteProfiles dnaJ domain profile. 31 95 IPR001623 -
Gso7g1299 580 PRINTS DnaJ domain signature 33 51 IPR001623 -
Gso7g1299 580 PRINTS DnaJ domain signature 51 66 IPR001623 -
Gso7g1299 580 PRINTS DnaJ domain signature 67 87 IPR001623 -
Gso7g1299 580 PRINTS DnaJ domain signature 87 106 IPR001623 -
Gso7g1299 580 SMART dnaj_3 30 87 IPR001623 -
Gso7g1299 580 Pfam Thioredoxin-like domain 209 308 - -
Gso7g1299 580 PANTHER DNAJ PROTEIN ERDJ3A 7 578 - -
Gso7g1299 580 SUPERFAMILY Chaperone J-domain 26 124 IPR036869 -
Gso7g1299 580 MobiDBLite consensus disorder prediction 92 134 - -
Gso7g1299 580 ProSitePatterns Nt-dnaJ domain signature. 72 91 IPR018253 -
Gso7g1299 580 Pfam DnaJ domain 31 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1299 Gso-Chr7 18690683 18694521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1299 33 94 C2H2 Transcription Factor Family AT1G74250 41.176 9.37e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1647 18 48322511 48326012 Gso7g1299 7 18690683 18694521 GST