Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1287 ATGACTGATGCAAATGCTGCTTCATTTGAGGCATTTCTCCAAGGGTGGATGGTGCGCCAAAGAGGTTACCTTGACGAGCTTCTCTCAGCTCAGCAACACTATCAGGAGATGCAGGATGATGATGATGTGAGGCAATTAATCAACAGGGTAATCTGCCACTATGGACAATACTTTGAAGAGAAATCAAAGATTGCCCACCAAAATGTTCTTCTTGTTTTCTCACCACCATGGTTCAGTTCATTGGAAAGAACCTTTCTTTGGGTTGGGGGGTTCAAGCCAGGAGTGTCTTTTCAGGTTGTGAACACAGCTTTGGAGGATTTGTCAGAAGAACAAAAGGAGAGGTTGAGTCTGCTGAACCAAGAGACCAAGGTGAAGGAGAGAGCCCTCAATGATGAGTTGGCCAAGCTTCATGAGAGTGTGGCAGCTCCACCGCTAGTGGACATGGCAAGGAGCCATGGGAGGGTGTGTTTCAGCAGGTCCTTCATGGCAGAGGAGGGCTCTTCTGTTCCAAGCACTTTCAGAGAGACATTGGAGAATCTTGTGGCCAATGCAGATGCTTTAAGGACAAACACATCTTTGAAGATTTTTCAGGTACTGAGACCTGCTCAGATTGTCTCATTCTTGGTTGCTGTGGCTGAGCTTCAGATCAGGATCAGGTCTTGGGGTTTGGACAAGGATTCTCAGAATGGAGGCCAAGGGTGA 702 0.4729 MTDANAASFEAFLQGWMVRQRGYLDELLSAQQHYQEMQDDDDVRQLINRVICHYGQYFEEKSKIAHQNVLLVFSPPWFSSLERTFLWVGGFKPGVSFQVVNTALEDLSEEQKERLSLLNQETKVKERALNDELAKLHESVAAPPLVDMARSHGRVCFSRSFMAEEGSSVPSTFRETLENLVANADALRTNTSLKIFQVLRPAQIVSFLVAVAELQIRIRSWGLDKDSQNGGQG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1287 233 Pfam Seed dormancy control 24 101 IPR025422 GO:0006351|GO:0043565
Gso7g1287 233 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 230 - -
Gso7g1287 233 Coils Coil 101 121 - -
Gso7g1287 233 ProSiteProfiles DOG1 domain profile. 6 228 IPR025422 GO:0006351|GO:0043565
Gso7g1287 233 PANTHER - 5 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1287 Gso-Chr7 18435126 18437245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1287 7 220 Calmodulin-binding Proteins AT1G77920 28.972 2.13e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1287 - - gmx:100780874 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1634 18 48074988 48077027 Gso7g1287 7 18435126 18437245 GST