Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1282 ATGGAGGGTCATCATCTCCATCACCATCACCGGCAACAACAACAACAACATCATCATCAACAACAACATCAACAACAACAGCATCATCACCACCCTCATCACAACATCACAACTAGTAACGTGGATGCCACGGATAGGTTCCCCCAATGGAGCATCCAGGAGACAAAAGAGTTCCTCATGATCCGTGCCGAGCTGGATCAGACTTTCATGGATACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCCACCCGGATGAAGGAAAAGGGTTTCCATAAAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGATGTGAAACGATGGAGCCAGAAGCGACGAGGCAGCAATTCCCGTTTTACAACGAGCTTCAAGCGATTTTCGCGGCGAGAATGCAGAGAATGTTGTGGGCGGAAGCAGAAGGAGGGTCCAACAAGAAGAAGGTGCACCTTTCCTCCGAGGACGAGGAAGAGGGCAATGAAGAGACAAGCGAGGGGGATCACAAGGGTAACATCACCAGCAAGAAAAAGAAGAAGGGCAAGATGGTAATTGGTGGAGGAGGGAGTGGTAACAACAACTTGGAGAGTTTGAAGGAGATCATGGATGAGTTCATGAGGCAGCAGATGCAAATGGAGGCACAGTGGATGGAAGCCTTTGAGGCAAGAGAGAATGAGAGGAGGCTGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCTTTGGAGAATGAGAGGTTAATGATGGACCAAAGATGGAGGGAGAGGGAAGAACAAAGAAGGATTAGAGAAGAAGTTAGGGCTGATAAGAGAGATGCTCTAATCACTGCTCTTCTAAACAAGCTCAGAAGAGAAGAGATGTAG 876 0.4806 MEGHHLHHHHRQQQQQHHHQQQHQQQQHHHHPHHNITTSNVDATDRFPQWSIQETKEFLMIRAELDQTFMDTKRNKQLWEVISTRMKEKGFHKSAEQCKCKWKNLVTRYKGCETMEPEATRQQFPFYNELQAIFAARMQRMLWAEAEGGSNKKKVHLSSEDEEEGNEETSEGDHKGNITSKKKKKGKMVIGGGGSGNNNLESLKEIMDEFMRQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERLMMDQRWREREEQRRIREEVRADKRDALITALLNKLRREEM* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1282 291 Coils Coil 200 220 - -
Gso7g1282 291 MobiDBLite consensus disorder prediction 149 200 - -
Gso7g1282 291 CDD GT1 48 113 - -
Gso7g1282 291 Pfam Myb/SANT-like DNA-binding domain 49 133 IPR044822 -
Gso7g1282 291 PANTHER - 1 289 - -
Gso7g1282 291 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 289 - -
Gso7g1282 291 Gene3D - 50 111 - -
Gso7g1282 291 MobiDBLite consensus disorder prediction 1 44 - -
Gso7g1282 291 MobiDBLite consensus disorder prediction 1 34 - -
Gso7g1282 291 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1282 Gso-Chr7 18344568 18346193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1282 37 289 Trihelix Transcription Factor Family AT5G01380 52.281 3.20e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso7g1282 Myb_DNA-bind_4 1.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1282 - - gmx:100778195 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1629 18 47996040 47997734 Gso7g1282 7 18344568 18346193 GST