Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1265 ATGGCATGTCCAGCAATGGCAAATGGGAACGGCTCATTGAAGAACTTGAAGCTAAATGACACCAAGGGAAAGACCATCACTTGCAAAGCTGCCGTGGTATATGGTCCTGGAGAGCCCTTTGTGGTGGAAAACATTCTTGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTACACTTCCATTTGTCACACCGATCTTAGCGCATGGCGAGGCGTGAACGAGGCTCAACGTGCTTATCCTCGGATTTTTGGCCATGAAGCATCTGGGATTGTGGAGAGTGTAGGGGAAGGAGTGAGTGAAGTTGAGGAAGGGGACATAGTAGTGCCAATATTCAATGGGGAGTGTGGAGAGTGTTCGATGTGCAAGTGTGAGAAGACCAACTTGTGTGAGAGGTTTGGAGTGGATGCCATGAAGAAGGTGATGGAAGGAGATGGCACAACAAGATTCTCCACTGTTAATGGGAAACCCATTTTCCATTTCTTGAACACTTCAACTTTCTCGGAGTACACGGTGGTGGATTCGGCCTGTGTGGTCAAGTTTCTGGACTCCGATCACAGTCTCAGCCACAAGAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGGGTTGGAGGCGCTTGGAATACAGCTAATGTGCATTCTGGTTCAACTGTAGCTATTTTCGGCTTAGGAGTTGTTGGGCTCGCTGTTGCTGAGGGGGCACGAGCTAGAGGTGCATCCAAAATAATAGGCGTAGACATCAATCCTGACAAATTCATCAAAGCCCAAACTATGGGAGTGACAGACTTCATAAACCCTGATGATGAAGAGAAGCCAGTATACGAGAGAATTAGAGAAATAACTGATGGAGGTGTACACTACAGTTTTGAATGTACTGGAAACGTGGACGTTTTAAGGGATGCCTTCTTGTCATCCCATGAGGGTTGGGGATTGACTGTAATATTGGGAGTTCATGCGTCACCAAAGTTGCTTCCCATCCACCCAATGGAGCTCTTAGACGGTCGCAACATTGTAGGATGTGTATTTGGAGGTTTCAAAGGGAGAAGTCAATTGCCTCACTTTGCCAAAGAATGTGGACAAGGAGTGGTGAAGCTGGATAATTTCATCACTCACGAGCTACCCTTTGAGGAGATAGACAAAGCCTTCGATCTTTTGATCACTGGGAAGTCACTGAGATGCCTTCTGCACTTCTAA 1203 0.4713 MACPAMANGNGSLKNLKLNDTKGKTITCKAAVVYGPGEPFVVENILVHPPQKMEVRIKILYTSICHTDLSAWRGVNEAQRAYPRIFGHEASGIVESVGEGVSEVEEGDIVVPIFNGECGECSMCKCEKTNLCERFGVDAMKKVMEGDGTTRFSTVNGKPIFHFLNTSTFSEYTVVDSACVVKFLDSDHSLSHKNLTLLSCGVSTGVGGAWNTANVHSGSTVAIFGLGVVGLAVAEGARARGASKIIGVDINPDKFIKAQTMGVTDFINPDDEEKPVYERIREITDGGVHYSFECTGNVDVLRDAFLSSHEGWGLTVILGVHASPKLLPIHPMELLDGRNIVGCVFGGFKGRSQLPHFAKECGQGVVKLDNFITHELPFEEIDKAFDLLITGKSLRCLLHF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1265 400 PANTHER ALCOHOL DEHYDROGENASE 21 399 - -
Gso7g1265 400 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 87 101 IPR002328 GO:0008270|GO:0016491
Gso7g1265 400 Gene3D - 205 343 - -
Gso7g1265 400 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 191 361 IPR036291 -
Gso7g1265 400 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 21 399 - -
Gso7g1265 400 Pfam Zinc-binding dehydrogenase 229 347 IPR013149 -
Gso7g1265 400 Gene3D - 31 395 - -
Gso7g1265 400 SUPERFAMILY GroES-like 349 400 IPR011032 -
Gso7g1265 400 Pfam Alcohol dehydrogenase GroES-like domain 54 181 IPR013154 -
Gso7g1265 400 SUPERFAMILY GroES-like 21 224 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1265 Gso-Chr7 17973880 17980835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1265 54 183 Monolignol Biosynthesis Gene Families AT4G39330 31.298 6.30e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1265 K00001 - gmx:100819896 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1613 18 47664862 47670698 Gso7g1265 7 17973880 17980835 GST