LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1265	ATGGCATGTCCAGCAATGGCAAATGGGAACGGCTCATTGAAGAACTTGAAGCTAAATGACACCAAGGGAAAGACCATCACTTGCAAAGCTGCCGTGGTATATGGTCCTGGAGAGCCCTTTGTGGTGGAAAACATTCTTGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTACACTTCCATTTGTCACACCGATCTTAGCGCATGGCGAGGCGTGAACGAGGCTCAACGTGCTTATCCTCGGATTTTTGGCCATGAAGCATCTGGGATTGTGGAGAGTGTAGGGGAAGGAGTGAGTGAAGTTGAGGAAGGGGACATAGTAGTGCCAATATTCAATGGGGAGTGTGGAGAGTGTTCGATGTGCAAGTGTGAGAAGACCAACTTGTGTGAGAGGTTTGGAGTGGATGCCATGAAGAAGGTGATGGAAGGAGATGGCACAACAAGATTCTCCACTGTTAATGGGAAACCCATTTTCCATTTCTTGAACACTTCAACTTTCTCGGAGTACACGGTGGTGGATTCGGCCTGTGTGGTCAAGTTTCTGGACTCCGATCACAGTCTCAGCCACAAGAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGGGTTGGAGGCGCTTGGAATACAGCTAATGTGCATTCTGGTTCAACTGTAGCTATTTTCGGCTTAGGAGTTGTTGGGCTCGCTGTTGCTGAGGGGGCACGAGCTAGAGGTGCATCCAAAATAATAGGCGTAGACATCAATCCTGACAAATTCATCAAAGCCCAAACTATGGGAGTGACAGACTTCATAAACCCTGATGATGAAGAGAAGCCAGTATACGAGAGAATTAGAGAAATAACTGATGGAGGTGTACACTACAGTTTTGAATGTACTGGAAACGTGGACGTTTTAAGGGATGCCTTCTTGTCATCCCATGAGGGTTGGGGATTGACTGTAATATTGGGAGTTCATGCGTCACCAAAGTTGCTTCCCATCCACCCAATGGAGCTCTTAGACGGTCGCAACATTGTAGGATGTGTATTTGGAGGTTTCAAAGGGAGAAGTCAATTGCCTCACTTTGCCAAAGAATGTGGACAAGGAGTGGTGAAGCTGGATAATTTCATCACTCACGAGCTACCCTTTGAGGAGATAGACAAAGCCTTCGATCTTTTGATCACTGGGAAGTCACTGAGATGCCTTCTGCACTTCTAA	1203	0.4713	MACPAMANGNGSLKNLKLNDTKGKTITCKAAVVYGPGEPFVVENILVHPPQKMEVRIKILYTSICHTDLSAWRGVNEAQRAYPRIFGHEASGIVESVGEGVSEVEEGDIVVPIFNGECGECSMCKCEKTNLCERFGVDAMKKVMEGDGTTRFSTVNGKPIFHFLNTSTFSEYTVVDSACVVKFLDSDHSLSHKNLTLLSCGVSTGVGGAWNTANVHSGSTVAIFGLGVVGLAVAEGARARGASKIIGVDINPDKFIKAQTMGVTDFINPDDEEKPVYERIREITDGGVHYSFECTGNVDVLRDAFLSSHEGWGLTVILGVHASPKLLPIHPMELLDGRNIVGCVFGGFKGRSQLPHFAKECGQGVVKLDNFITHELPFEEIDKAFDLLITGKSLRCLLHF*	401

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso7g1265	400	PANTHER	ALCOHOL DEHYDROGENASE	21	399	-	-
Gso7g1265	400	ProSitePatterns	Zinc-containing alcohol dehydrogenases signature.	87	101	IPR002328	GO:0008270\|GO:0016491
Gso7g1265	400	Gene3D	-	205	343	-	-
Gso7g1265	400	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	191	361	IPR036291	-
Gso7g1265	400	PANTHER	ALCOHOL DEHYDROGENASE-LIKE 3	21	399	-	-
Gso7g1265	400	Pfam	Zinc-binding dehydrogenase	229	347	IPR013149	-
Gso7g1265	400	Gene3D	-	31	395	-	-
Gso7g1265	400	SUPERFAMILY	GroES-like	349	400	IPR011032	-
Gso7g1265	400	Pfam	Alcohol dehydrogenase GroES-like domain	54	181	IPR013154	-
Gso7g1265	400	SUPERFAMILY	GroES-like	21	224	IPR011032	-

Showing 1 to 10 of 10 entries

Previous1Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1265	Gso-Chr7	17973880	17980835	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1265	54	183	Monolignol Biosynthesis Gene Families	AT4G39330	31.298	6.30e-11	61.2

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1265	K00001		-	gmx:100819896	774.237

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso18g1613	18	47664862	47670698	Gso7g1265	7	17973880	17980835	GST

Showing 1 to 1 of 1 entries

Previous1Next