Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1256 ATGTTTTGCAATTGCTTTGGTGCTTTGAATCGATGTGGAAGGAGGGATGATTCTGAAGACCAGCCACATGAACAAGCAACAGGAGATTTTCATCCTTCAAGCAAAATCGGTGGAGGAGGCTATGGAGTTGTCTACAAGGGAGTTTTAAGGGATGGTACTCAAGCTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAGGGAACCCATGAATTTATGACAGAAATTGATATGATATCAAATATACGGCATCCAAATCTTGTGGAACTGATTGGCTGCTGTGTTGAGGGTAGTCACCGAATATTGGTTTATGAATTTTTGGAGAACAATAGCCTTGCGAGCTCTTTGCTTGGTTCAAAAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGTTGCTATTTGTCGTGGCACGGCTTCTGGTCTAACTTTTCTTCATGATGAGGCACAACCAAACATTGTTCACAGGGATATCAAGGCCAGCAACATATTGTTGGATGGGAACTTCAATCCGAAAATTGGGGATTTTGGTCTGGCAAAACTTTTTCCTGATAATGTCACCCATGTTAGTACTCGAGTTGCAGGAACTGTGGGATATCTTGCCCCAGAATATGCACTTCTGGGGCAACTTACAAAGAAGGCAGACGTGTACAGTTTTGGGATTCTTATGCTTGAAATAATCAGTGGGAAAAGTAGTAGCATAGCTGCCTTTGAGGATGATTATTTGGTTTTGGTGGAATGGGCTTGGAAGCTGAGAGGAGAAAATAGGCTTTTGGACCTTGTTGATTCAGAACTAAGTGAATATGATGAGAGTGAGGTGTATAGGTTCCTCATAGTGGCTCTATTTTGCACCCAATCAGCCGCTCAACATAGACCAAGCATGAAGCAAGTATTGGAAATGCTTTGCAAGGAAGTTCATCTCAATGAGAAGGCATTGACTGAGCCCGGAATATACAGATGGCACAGCAATGGAAAGAGGGGTGGTTCTTTGAATGAGACATCATCTTCTCAAGCAATCAAGTACAAAAGAACCGAAAATCCACATGAAGCACCTTCAACTCACTTCAGTGGTACAGATATTGTGACAGAGATGCTTCCAAGATGA 1101 0.4223 MFCNCFGALNRCGRRDDSEDQPHEQATGDFHPSSKIGGGGYGVVYKGVLRDGTQAAIKSLSVESKQGTHEFMTEIDMISNIRHPNLVELIGCCVEGSHRILVYEFLENNSLASSLLGSKSKYVALDWPKRVAICRGTASGLTFLHDEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSIAAFEDDYLVLVEWAWKLRGENRLLDLVDSELSEYDESEVYRFLIVALFCTQSAAQHRPSMKQVLEMLCKEVHLNEKALTEPGIYRWHSNGKRGGSLNETSSSQAIKYKRTENPHEAPSTHFSGTDIVTEMLPR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1256 366 Gene3D Transferase(Phosphotransferase) domain 1 106 314 - -
Gso7g1256 366 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 351 - -
Gso7g1256 366 ProSiteProfiles Protein kinase domain profile. 30 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1256 366 SUPERFAMILY Protein kinase-like (PK-like) 22 300 IPR011009 -
Gso7g1256 366 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 25 351 - -
Gso7g1256 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Gso7g1256 366 CDD STKc_IRAK 49 302 - -
Gso7g1256 366 SMART serkin_6 30 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1256 366 Pfam Protein tyrosine and serine/threonine kinase 33 300 IPR001245 GO:0004672|GO:0006468
Gso7g1256 366 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Gso7g1256 366 MobiDBLite consensus disorder prediction 14 34 - -
Gso7g1256 366 Gene3D Phosphorylase Kinase; domain 1 21 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1256 Gso-Chr7 17880691 17886899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1256 24 315 Receptor kinase-like Gene Family AT1G56120 53.082 1.46e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso7g1256 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1256 - - gmx:100816683 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1603 18 47530387 47537036 Gso7g1256 7 17880691 17886899 GST