Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1250 ATGAACCATCCTTGTGCAAATTCTAAGAGCCTACTGTTACAAGTCCTTAATGGATGTCTTCTATTATGCATGATCTTAATCAAGGACTCAGCAATAGCAGCAATCCCTACCGGAAATGAAACTGATTTGCAAGCTTTAGTTCACTTCAAGAGTAAGATAGTTGAAGATCCATTCAACACTATGAGTTCTTGGAATGGCTCCATCAATCACTGCAATTGGATAGGAATCACATGCAACATCTCCAATGGAAGAGTCACACACCTTAGCCTTGAGCAACTGAGACTAGGAGGCACTCTTACACCCTTCATAGGAAACCTCACATTCCTCACCACAGTCAACTTGTTAAACAATAGCTTCCATGGTGAATTTCCTCAAGAGGTTGGTCGTTTACTATACCTTCAATACCTAAACTTCAGCATAAACAACTTTGATGGCAGTTTTCCAAGTAATCTCAGCCACTGCACAAATCTAAGAGTGCTAGCTGCAGGTCTTAACAATCTTACAGGAACAATCCCAACTTGGATTGGAAACCTTTCTTCCTTATCTCGCGTTAGCTTCGGTTTAAACAACTTCATTGGACGCATACCACATGAGGTAGGCCTTTTGTCAAGCTTGACATCTCTTGTGCTATATGGGAATTACTTAACTGGCACAGTTCCTTCTTCAATCTATAATATCTCTTCCTTATACTATTTCACTTTTACTCAAAACCATCTTCATGGAACCTTACCAGCAGATGTTGGATTTACTCTTCCTAACATTCAAGTATTTGCTGGTGCGGTCAACAATCTCACAGGGTCTGTTCCTGCATCGTTGTTGAACGCATCAAAACTTGAAATTCTTGACTTTTCCTTGAATGGTCTCACTGGAACACTGCCTAAGAACTTAGGGGTATTGTACAGGTTAACTAGACTTAGCTTTGAGCACAACAGACTTGGAACTGGGAAAACAGATGATCTTAGCTTTCTTGATTCTTTGGTCAACTGCACAGCTCTACAAGTTTTACGTCTAGGCGTAAATAATTTTGGTGGGGTGTTGCCTAAATCAATTGCTAACTTTTCAAGCCAACTGCACACATTTGCCCTTAATTCTAATAGAATACATGGAAATATACCTGCTGGAATTGGAAATCTTGCTAACCTGGCCCTTATAGGATTAGAAGGAAACGAGCTAACCAGTGGTGTTCCTGATGCATTAGGTAGGCTGCAAAATCTGCAATTATTGTATCTGAATGTCAACAAATTTTCAGGTAGAATCCCATCCTCCTTGGGAAATTTATCTTTAATAACAAAACTCTTTCTGGAGGAAAATAACTTTGAGGGAAGCATACCTTCTAGTCTTGGAAACTGCCAAAAGTTATTGGTACTCAGCCTTTATAGCAACAAGCTCAGTGGCACCATACCAACAGAAGTTATTGGTCTTTCTTCACTAGCAATATACTTTGATGTGTCTTATAATGCTTTGTCAGGGACCCTGCCGGTTGAAGTGAGTAAGCTACGTAATCTTGCAGAGTTGGTTCTGTCTGAGAACAACTTTTCTGGAGTTATTCCATCTTCTCTTGGCAGTTGTATTAGCCTGGAAAAGCTGCATTTGCAGGGTAATTCTTTTGAGGGAAACATTCCTCAAACTATAAAGGATTTGAGAGGTTTACTAGACATAGATCTTTCGCGAAATAACTTGTCCGGTAAAATTCCGGAGTTTCTTGGTGGATTCACTGAGCTCAAACATCTCAATCTTTCTTACAATAATTTTGAAGGTGAAATACCAAAGAATGGAATCTTCAAGAATGCAACTTCCATTTCATTATATGGAAATATCAAGCTATGTGGGGGTGTCTCAGAACTAAATTTCCCTCCATGCACTATAAGGAAGAGGAAGGCCTCTCGGCTAAGAAAACTTGTTGCCTCTAAGGTGGCTATCCCTATAGCTATTGCACTTATATTACTATTGCTTCTATCATGTTTTCTTACATTGTTCCCCATAGTAAAAAGAGCAAAAAGGAAAACTCCTACATCAACTACTGGAAATGCTTTGGATTTGGAAATTTCTTACTCAGAAATTACCAAGTGCACTGGTGGCTTCTCTCAGGATAACCTGATTGGTTCAGGAAGTTTTGGTTCTGTATACAAAGGAACTCTCTCGGGTGATGGATCAATTGTTGCAGTTAAAGTGTTAAATCTTCAGCAGAGAGGAGCTTCAAGGAGCTTCATTGATGAATGCCATGTTCTGAGAAGCATAAGGCACCGTAACCTTCTCAAGATCATAACCGCCATCTCAGGTGTTGATCATCAAGGCAATGACTTCAAAGCTCTAGTGTTTGAGTACATGCCTAATGGAAGTCTAGAAGATTGGTTGCATCCAGTAAACAATGTGCAAACTCAGACTAAGAAACTGACATTTATCCAAAGACTGAACATAGCAATTGATGTTGCTTGTGCACTGGAATATCTCCACCACTTCTGTGAAACTCCAATTGTTCATTGTGACATAAAGCCAAGCAATGTACTTCTTGACAATGATTTGGTTGCTCATGTGGGTGACTTTGGATTAGCTACATTTCTGTTTGAAGAATCAAGCAAGTTTTCCACACAATCAGTTATTTCAGCTAGCCTAAGGGGTTCTATTGGATACATCCCTCCAGAGTATGGTATGGGTGGGAAGCCTTCTACACTTGGAGATGTCTACAGTTATGGGATACTATTACTGGAGATTTTCACAGGAAAAAGACCAACAGATGAAGAAGCATTTGAAGGTGGCATGGGAATTCACCAGTTTGTAGCAATGGCTTTACCTAACCGTGTCACGGATATAGTTGATCCTTCATTAGTTTCTGAACAAGACTTTGATGAGGAAAATCAAGAATTTGAGGATGAAGAGAAAGCAATAAGGAAGAACTATGAGATTGAAGCCTCAGCTAAAGGTTTGATGGAGGATTGCTTTGTGTCACTGATGGAAATTGGAGCGTCTTGCTCTGCAAATCCACCTAGTGAGAGAATGCCAATCACAGTGGTGATCAACAAGCTACATGCTATCAAGAACTCGTTTAAAAAGATAAAGCATAGTGCTATATGA 3072 0.3975 MNHPCANSKSLLLQVLNGCLLLCMILIKDSAIAAIPTGNETDLQALVHFKSKIVEDPFNTMSSWNGSINHCNWIGITCNISNGRVTHLSLEQLRLGGTLTPFIGNLTFLTTVNLLNNSFHGEFPQEVGRLLYLQYLNFSINNFDGSFPSNLSHCTNLRVLAAGLNNLTGTIPTWIGNLSSLSRVSFGLNNFIGRIPHEVGLLSSLTSLVLYGNYLTGTVPSSIYNISSLYYFTFTQNHLHGTLPADVGFTLPNIQVFAGAVNNLTGSVPASLLNASKLEILDFSLNGLTGTLPKNLGVLYRLTRLSFEHNRLGTGKTDDLSFLDSLVNCTALQVLRLGVNNFGGVLPKSIANFSSQLHTFALNSNRIHGNIPAGIGNLANLALIGLEGNELTSGVPDALGRLQNLQLLYLNVNKFSGRIPSSLGNLSLITKLFLEENNFEGSIPSSLGNCQKLLVLSLYSNKLSGTIPTEVIGLSSLAIYFDVSYNALSGTLPVEVSKLRNLAELVLSENNFSGVIPSSLGSCISLEKLHLQGNSFEGNIPQTIKDLRGLLDIDLSRNNLSGKIPEFLGGFTELKHLNLSYNNFEGEIPKNGIFKNATSISLYGNIKLCGGVSELNFPPCTIRKRKASRLRKLVASKVAIPIAIALILLLLLSCFLTLFPIVKRAKRKTPTSTTGNALDLEISYSEITKCTGGFSQDNLIGSGSFGSVYKGTLSGDGSIVAVKVLNLQQRGASRSFIDECHVLRSIRHRNLLKIITAISGVDHQGNDFKALVFEYMPNGSLEDWLHPVNNVQTQTKKLTFIQRLNIAIDVACALEYLHHFCETPIVHCDIKPSNVLLDNDLVAHVGDFGLATFLFEESSKFSTQSVISASLRGSIGYIPPEYGMGGKPSTLGDVYSYGILLLEIFTGKRPTDEEAFEGGMGIHQFVAMALPNRVTDIVDPSLVSEQDFDEENQEFEDEEKAIRKNYEIEASAKGLMEDCFVSLMEIGASCSANPPSERMPITVVINKLHAIKNSFKKIKHSAI* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1250 1023 SUPERFAMILY L domain-like 355 610 - -
Gso7g1250 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Gso7g1250 1023 Gene3D Ribonuclease Inhibitor 41 154 IPR032675 -
Gso7g1250 1023 Gene3D Ribonuclease Inhibitor 250 318 IPR032675 -
Gso7g1250 1023 SUPERFAMILY RNI-like 87 416 - -
Gso7g1250 1023 ProSiteProfiles Protein kinase domain profile. 694 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1250 1023 Gene3D Phosphorylase Kinase; domain 1 677 775 - -
Gso7g1250 1023 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 36 1012 - -
Gso7g1250 1023 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 36 1012 - -
Gso7g1250 1023 Gene3D Ribonuclease Inhibitor 319 620 IPR032675 -
Gso7g1250 1023 SMART serkin_6 694 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1250 1023 Pfam Protein kinase domain 695 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1250 1023 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Gso7g1250 1023 Gene3D Transferase(Phosphotransferase) domain 1 776 1022 - -
Gso7g1250 1023 SUPERFAMILY Protein kinase-like (PK-like) 673 1008 IPR011009 -
Gso7g1250 1023 CDD STKc_IRAK 700 1008 - -
Gso7g1250 1023 Gene3D Ribonuclease Inhibitor 155 249 IPR032675 -
Gso7g1250 1023 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Gso7g1250 1023 Pfam Leucine rich repeat 525 584 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1250 Gso-Chr7 17801083 17805686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1250 39 1022 Receptor kinase-like Gene Family AT3G47570 44.412 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso7g1250 Pkinase 8.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1250 - - gmx:106794146 1898.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1600 18 47496805 47501004 Gso7g1250 7 17801083 17805686 GST