Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1221 ATGATAGTTGCTGTGGATTTGAATGCCTCACCTGTGCCAGAGGACGATGAAGATGATTTTGGCCGCCAGGTTGAAGAGTACCGTACACCAGAAGAGCGTGTGGAATCTGCAGTTGATATTGCTCACCAGGAATGTGAAGAAAGAAAAAGAAAGTTGAAAAGAGAACATTCAGATGACAAACCTGTGCAAGTATCACAATCACCTGGACATGATCAGTTATTTCATACTAAGATTCTTAAATCATATGATAGAAGTAAGCTTCCTCCCGGTTGGTTGGATTGCCCTTCATTTGGCCAGGAAATTTATTGCATGATACCATCCAAGGTTCCACTTGGTGAATCATTCAATGATGACATCATTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAGCTTGATCTGGTAATTGATTTGACGAATACTTCTCGATACTATTCAGTAGCAGATTTAAAGAAAGAGGGTATCAAGTATGTTAAGATTCAATGCAAGGGCCGTGATTCTGTACCTGATAATTTATCTGTTAATCATTTTGTCTATGAGGTTATGCAATTTCTATTACGTCAAAAACACTCGAGGAAGCATATACTTGTTCATTGTACACATGGTCATAATCGTACAGGATACATGATCATCCATTATCTGATGCGCTCAATGTCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGATGCACGCCCTCCGGGAATCTATAAACCTGAGTACATTGATGCATTGTATGCATTTTATCATGAAAAAAAGCCTGAAATGATAGTTTGTCCTCCTACCCCCGAGTGGAAGAGAACTCCTGAACTTGTTGATCTAAATGGTGAAGCAATGCCAGATGATGATGATGATGGAGTACCAGGCTCTCCTTTGCATGTATGGGAGAATCATGTGACTGACACTATAATGAGAAATGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGTCAGTTCTGCTTTCGAACACTCAAACTAGGTGTTGGGGCCAGAGGGCACATGCAATTTCCAGGGTCACACCCAGTTTCTTTAAACAGGGAGAATTTACAACTGTTACGACAACGTTATTATTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGACGGATGTTACTTGATTGATAGAAGCTTCAATTTTCGAAGGGTTCAAATGAGGTTTCCTTGCAGGATTACAAAGGATGGCATGGCTGAGAAGACACACCACTTCACATTGCTTGATGGGGAGATGATTATTGATACATTGCCAGATTCCAAAAAGCAGGAAAGGAGATACCTCATATATGATCTGATGGCAATCAATGGAGTATCAGTAATAGAGCGACCATTTTATGAACGGTGGAAGATGCTAGAGAAAGTTATTGAACCCAGGAATCAGGAACGGTTCCAGAGTAGAAATCCTTACTATAGATATGACATGGAGCCATTCCGGGTGAGGAGAAAAGATTTTTGGCTGCTCTCTACTGTCACAAAGCTTTTAAGCGAATTCATTCCGAAACTCTCACATGATGCAGATGGTCTCATATTTCAGGGATGGGATGATCCTTACATACCTCGCACTCACGAAGGCCTCTTGAAGTGGAAATATGCTGAGCTGAATTCAGTTGATTTTCTCTTTGAGATTGATAACGATTGTCAGCTACTTCTTCTGTATGAACGTGGAAAAAGGAAGCTCTTGGAAGGCTATAGGGTTGCATTTGAAGGTTTGGATCCCTTGCATTATTCCGGAAAGATCATTGAGTGTTCTTGGGATTCTGACAGACAGGAATGGATATTCAAGCGAATCAGAACAGATAAATCAACACCAAATGACTTTAATACTTATAGAAAGGTGATGCGAAGTATAAGAGACAATATCACAGAGGATGTCCTGTTGAATGAAATAAATGAGATAATTTGCCTTCCCTTGTATGCAGACAGGATAAGAATTGATAGCAAAGCCCATATCCACACCAATATGGCACGGCGAAGGTAA 2040 0.3975 MIVAVDLNASPVPEDDEDDFGRQVEEYRTPEERVESAVDIAHQECEERKRKLKREHSDDKPVQVSQSPGHDQLFHTKILKSYDRSKLPPGWLDCPSFGQEIYCMIPSKVPLGESFNDDIIPGKRYSFKQVIHQQRVLGRKLDLVIDLTNTSRYYSVADLKKEGIKYVKIQCKGRDSVPDNLSVNHFVYEVMQFLLRQKHSRKHILVHCTHGHNRTGYMIIHYLMRSMSMSVTQAIKIFSDARPPGIYKPEYIDALYAFYHEKKPEMIVCPPTPEWKRTPELVDLNGEAMPDDDDDGVPGSPLHVWENHVTDTIMRNDDVLGDEIPNDQQDAFRQFCFRTLKLGVGARGHMQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRITKDGMAEKTHHFTLLDGEMIIDTLPDSKKQERRYLIYDLMAINGVSVIERPFYERWKMLEKVIEPRNQERFQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLSEFIPKLSHDADGLIFQGWDDPYIPRTHEGLLKWKYAELNSVDFLFEIDNDCQLLLLYERGKRKLLEGYRVAFEGLDPLHYSGKIIECSWDSDRQEWIFKRIRTDKSTPNDFNTYRKVMRSIRDNITEDVLLNEINEIICLPLYADRIRIDSKAHIHTNMARRR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1221 679 Pfam mRNA capping enzyme, C-terminal domain 555 647 IPR013846 -
Gso7g1221 679 MobiDBLite consensus disorder prediction 46 68 - -
Gso7g1221 679 Gene3D - 590 654 IPR012340 -
Gso7g1221 679 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 265 IPR020422 GO:0006470|GO:0008138
Gso7g1221 679 ProSiteProfiles ATP-dependent DNA ligase family profile. 438 578 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Gso7g1221 679 SMART dsp_5 121 261 IPR020422 GO:0006470|GO:0008138
Gso7g1221 679 CDD RNA_5'-triphosphatase 90 256 - -
Gso7g1221 679 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 315 551 - -
Gso7g1221 679 Pfam mRNA capping enzyme, catalytic domain 356 550 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gso7g1221 679 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 679 - -
Gso7g1221 679 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Gso7g1221 679 MobiDBLite consensus disorder prediction 46 61 - -
Gso7g1221 679 MobiDBLite consensus disorder prediction 1 20 - -
Gso7g1221 679 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Gso7g1221 679 PANTHER MRNA-CAPPING ENZYME 3 679 - -
Gso7g1221 679 Gene3D Protein tyrosine phosphatase superfamily 83 295 IPR029021 -
Gso7g1221 679 PIRSF mRNA_capping_HCE 74 679 IPR017074 GO:0004484|GO:0006370|GO:0140818
Gso7g1221 679 Gene3D DNA ligase/mRNA capping enzyme 315 550 - -
Gso7g1221 679 SUPERFAMILY Nucleic acid-binding proteins 553 661 IPR012340 -
Gso7g1221 679 CDD Adenylation_mRNA_capping 344 551 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gso7g1221 679 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 276 IPR029021 -
Gso7g1221 679 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1221 Gso-Chr7 17233675 17246560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1221 1 679 Protein tyrosine phosphatase (PTP) family AT3G09100 67.737 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1221 K13917 - gmx:100818110 1372.45