Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1163 ATGGACCAACTTAACATTGCAATGCTAATATTCACAACTATAGCATTGTTTCTATCACGTGCCGAGGCCATGCGTAAGTGCGGGAATTGCGGTTTGAACCCGGTTCCGTATCCGTTAAGCACTGGACCCGATTGTGGTGACCCGTGGTACAAGATTCGGTGCACCGCGGGTACACTGTGGTTGGATGCACTCGCCGGGTCAGCCTACATGATCAGCTCCATTGACCCGTTAACCCGTAGTATCATAACCCGACCCGCTTCAATTACACCAAAGACATGCGTGTCCACGGACTTCCACAGCGAAGGCATGCACCTGAACGAAACCCTTCCTTTCAGTGTGGCTTCAGGAAACACCGTTTTTCTCTTCAACTGCACCACCCACGCGCCTTCGATGAACTGCGCCGCAAGCGGCACGTGCCACAGGTATGTTAAGGAGCACGCGGATTTCGGCGCGTGCGGGCGCGTGGGAGTGTGCTGCGAGTACAAGAGTGCTGGATCCCTCAAAGAATATGTGGTTCGGGTACACGGCGGAGGATGCGCGGCGTATCAGAGTTTTGTGGATTTTAACGGCACGGCGGCGGGAAAGCGGTGGCCGGAGCCTGGGGTAGGGATCAAGTGGGTGGCACCACAGGAACCGGTTTGTAAGGCGCCAATAGATTGCAAGGAATTGTTGAACTCGAAATGTGGAGTGGGCCCCGCTGGTGGTGTTGTGCAAAGGTGCTTGTGCAATGTTGGGTTTAAGTGGGACCCGATCAATGGTTCGTGTCAACCTCAAGCCCAGACACAGAATACAAAGGGCAAAGGACATGGAAAAGATAGCAACGGCAAAGTTCGGAAGAAAAAGAAAATGCTTCTGGCTGTGGTTGCTTCCTTAGGAGGAATATTCTCTATTGTAACAGTTATAGGAGTCATTTTCTACAAGAAGCATAATCAAGCAAAGCAGGCCAAAATCAAAAAGAGGAAAGAAATCTCAAGTGCCAAAGCCAATGCTTTATCATCAAGAATCTTCACTGGTAGAGAGATAAGAAAAGCAACCAACAATTTCTCCCAAGAAAACCTCGTTGGCACTGGTGGCTTTGGTGAAGTCTTCAAGGGAACATTTGACGATGGAACCGTCTTTGCCATCAAACGTGCCAAGCTTGGATGCACCAAAGGCATTGATCAAATGCAAAACGAGGTCCGAATTCTCTGCCAAGTAAACCACAGAAGCCTAGTTAGACTCCTTGGTTGTTGCTTGGAACTTGAAAACCCTTTGCTAATATACGAGTACGTCTCAAATGGGACCCTTTTCGACTACCTTCATCGCTACTCTTCTGGCTCTAGGGAACCCCTCAAATGGCATCAAAGACTCAAAATTGCACACCAAACAGCTGAAGGGCTTTGCTATCTGCATTCAGCAGCCGTGCCACCAATTTACCACCGCGACGTGAAATCAAGCAACATACTTCTTGATGACAAGCTTGATGCAAAAGTTTCTGATTTTGGGCTATCTAGGCTTGTTGAATTGGCTGAAGAGAACAAGAGCCATATTTTCACTAGTGCTCAAGGGACACTGGGGTATCTAGACCCCGAGTATTATCGTAACTTTCAGTTGACGGATAAGAGCGATGTTTATAGCTTTGGAGTGGTGTTGATGGAGTTGCTCACTGCTCAGAAGGCTATTGATTTCAATAGGGAAGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTTGAGGACAAGTTGATGGATGTGGTTGATCCTCTGCTTAAAGAGGGAGCTAGTGCGTTGGAATTGGAAACTATGAAGTCATTGGGGTATCTTGCAACTGCATGCGTGGATGACCAGAGGCAAAAACGGCCTTCAATGAAAGAAGTAGCTGATGATATTGAATATATGATTAAAATTGTTAAGGGTCAGGTTTCCAAATCATGA 1923 0.4763 MDQLNIAMLIFTTIALFLSRAEAMRKCGNCGLNPVPYPLSTGPDCGDPWYKIRCTAGTLWLDALAGSAYMISSIDPLTRSIITRPASITPKTCVSTDFHSEGMHLNETLPFSVASGNTVFLFNCTTHAPSMNCAASGTCHRYVKEHADFGACGRVGVCCEYKSAGSLKEYVVRVHGGGCAAYQSFVDFNGTAAGKRWPEPGVGIKWVAPQEPVCKAPIDCKELLNSKCGVGPAGGVVQRCLCNVGFKWDPINGSCQPQAQTQNTKGKGHGKDSNGKVRKKKKMLLAVVASLGGIFSIVTVIGVIFYKKHNQAKQAKIKKRKEISSAKANALSSRIFTGREIRKATNNFSQENLVGTGGFGEVFKGTFDDGTVFAIKRAKLGCTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELENPLLIYEYVSNGTLFDYLHRYSSGSREPLKWHQRLKIAHQTAEGLCYLHSAAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEDKLMDVVDPLLKEGASALELETMKSLGYLATACVDDQRQKRPSMKEVADDIEYMIKIVKGQVSKS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1163 640 ProSiteProfiles Protein kinase domain profile. 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1163 640 Gene3D Phosphorylase Kinase; domain 1 306 423 - -
Gso7g1163 640 SUPERFAMILY Protein kinase-like (PK-like) 323 626 IPR011009 -
Gso7g1163 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 16 635 - -
Gso7g1163 640 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Gso7g1163 640 Pfam Protein tyrosine and serine/threonine kinase 351 625 IPR001245 GO:0004672|GO:0006468
Gso7g1163 640 MobiDBLite consensus disorder prediction 257 277 - -
Gso7g1163 640 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Gso7g1163 640 SMART serkin_6 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1163 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gso7g1163 640 CDD STKc_IRAK 354 627 - -
Gso7g1163 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 635 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1163 Gso-Chr7 16247265 16250902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1163 26 640 Receptor kinase-like Gene Family AT5G02070 53.712 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso7g1163 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1163 - - aprc:113862410 1038.1