Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1162 ATGAGGATCTTAAATCTCTCTCTTTTGGTCCTCACATTTACCATTTCCCTATCTTCCTTCTCATTTGTCAATGCTTTCAAACGTTGTCCAAATTGTGGCCAAACTAGAGTGCCATACCCATTGAGCACTGCCCCAAACTGTGGTGACCCATCCTACAAGATTCGTTGCACTGGAGGAACACTCTTCTTCGACTCCATCAATGGTTTCTCTTATGCGATCACCGCCATCAACCCCACTACGCAGCGTTTCATTCTCCACCCATCAGGTTTCTTAAACAACACGTGCATGTCCACCGATTTCCCAAACGAAGGGATTTGGCTCGACACCAACTCCCCCTTCAACATTACCTCCAGCAACACGGTGGTCCTCTTAAACTGCTCCAACAACGTCTTTACCACACCGCGGAACTGCTCGTTATCGAGCATTTGCCACAAGTATGTGAAAGAAAATGATGTGGCAGCAAAAATATGCGGGGCACGGAGTCATACCCCGCAGACATGCTGCCACATCAAAACTGGTGGGTCTGTCACTGCTTATAGGATAAGGGTGAGGAAGGAACGGTGTTCCGCGTATTTTAGCTTTCCCAATTTGGATCCTTCTTTGCCGGTGAGTATGTGGCGGCCAGGGGTGGAACTAGAGTGGGAGTTGCCGGAGGAGCCGTCGTGCAGAGTTAATGAAGATTGCTTGGATTTGGAAAACTCCGTTTGTTCGCCGAATCCGATGATCGGTGGATCGAGGAAGTGCATGTGCAAGCGTGGCTATGAATGGGATTCTGTAAACGGAATATGTCAAAGCACAACATTGTTAGCAATCGCCACGCTAACAACGGCCATGATCACAACATTGGTGTTATACCTTCGTAGGCAAAGGATCAAAGGAGAAACCGAACAAAGCCTAAGCAGGGCACGCGACATATTAAACGCAAACAATAGTGGCGGCAGATCCGCAAAGATCTTCACCATGAAAGAGCTCACAAAGGCAACAAGCAACTTCTCCAAAGCCAACCTCCTAGGTTTCGGCGGCTTCGGCGAGGTCTTCAAAGGAACCCTAGACGACGGAACCATCACAGCCATCAAGAGAGCCAAACCCGGCAACATAAGAGGCATAGACCAAATCCTAAACGAGGTCAAAATCCTCTGCCAAGTCAACCACAGAAGCCTCGTGAGACTGTTAGGGTGTTGTGTTGAACTTCCCGAGCCCCTTCTTGTGTACGAATACGTCCCCAATGGAACCCTTTTCGAGCACCTTCACCACCACCACCACAACAACAACTCTAGTAAAGGGATTCGACTCGGGTGGCATTCGAGATTGCGAATCGCGCACCAAACCGCTGAAGGAATTGCATATCTTCACAATGCAGCTGTGCCAAGAATTTACCATAGAGATATAAAATCTAGTAACATTCTTTTGGATGATAACCTTGATGCCAAGGTTTCTGACTTTGGTCTTTCTAGGTTGGTTGTGAGTGATGCAACACACATAACCACGTGTGCTAAGGGGACATTAGGGTATCTTGACCCGGAATACTATGTGAACTTTCAGCTCACGGATAAGAGTGATGTGTATAGCTTTGGCGTGGTTTTGTTGGAGCTTTTGACTTCGAAGAAGGCGATTGATTTCAATAGGGAAGAGGAGGATGTGAACTTGGTGGTTTTGATTAAGAGGGCTTTGAGGGAAGGGAGGTTGATGGATAATGTTGATCCTATGCTGAAGAGTGGTGATAGTAGGTTGGAGTTGGAAAGTATGAAGGCGTTTGGGGCTCTTGCTATTGCGTGCTTGGATGATCGAAGGAAGAATAGACCTACGATGAAAGATATTGCTGATGAGATTGAGTGCATTATTGGCATTCTTGTTGGTGCTAAGGTTGATGGTTTGGAGGTTTAG 1884 0.4708 MRILNLSLLVLTFTISLSSFSFVNAFKRCPNCGQTRVPYPLSTAPNCGDPSYKIRCTGGTLFFDSINGFSYAITAINPTTQRFILHPSGFLNNTCMSTDFPNEGIWLDTNSPFNITSSNTVVLLNCSNNVFTTPRNCSLSSICHKYVKENDVAAKICGARSHTPQTCCHIKTGGSVTAYRIRVRKERCSAYFSFPNLDPSLPVSMWRPGVELEWELPEEPSCRVNEDCLDLENSVCSPNPMIGGSRKCMCKRGYEWDSVNGICQSTTLLAIATLTTAMITTLVLYLRRQRIKGETEQSLSRARDILNANNSGGRSAKIFTMKELTKATSNFSKANLLGFGGFGEVFKGTLDDGTITAIKRAKPGNIRGIDQILNEVKILCQVNHRSLVRLLGCCVELPEPLLVYEYVPNGTLFEHLHHHHHNNNSSKGIRLGWHSRLRIAHQTAEGIAYLHNAAVPRIYHRDIKSSNILLDDNLDAKVSDFGLSRLVVSDATHITTCAKGTLGYLDPEYYVNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEEDVNLVVLIKRALREGRLMDNVDPMLKSGDSRLELESMKAFGALAIACLDDRRKNRPTMKDIADEIECIIGILVGAKVDGLEV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1162 627 SUPERFAMILY Protein kinase-like (PK-like) 315 608 IPR011009 -
Gso7g1162 627 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 616 IPR045274 GO:0007166
Gso7g1162 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Gso7g1162 627 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 28 616 - -
Gso7g1162 627 Gene3D Transferase(Phosphotransferase) domain 1 407 616 - -
Gso7g1162 627 Pfam Protein kinase domain 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1162 627 CDD STKc_IRAK 337 611 - -
Gso7g1162 627 Gene3D Phosphorylase Kinase; domain 1 304 406 - -
Gso7g1162 627 ProSiteProfiles Protein kinase domain profile. 331 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1162 627 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Gso7g1162 627 SMART serkin_6 331 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1162 Gso-Chr7 16228259 16234101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1162 28 617 Receptor kinase-like Gene Family AT5G02070 52.903 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso7g1162 Pkinase 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1162 - - gmx:100775709 1209.9