Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1160 ATGGAAGCCACTTCTATAACGCAGTTGTTGAAGGGCTTTTGTGATCACACACAGTGGAAATATGCTGTTTTTTGGAAGCTTGACCACCATTTTCCTATGGTTGTTGGCAAAATAGCCCTTTCCAGGGATCATTGTTGGGTTTCCTATGAGGATATTCTCACCGGTAGATTTGACACAGATTTAATCCCTGAGTGTCCTGATGAGTGGCTTCTTCAATTTGCATGTGGCATCAAGACTATTGTGCTGGTACCAGTGCTTCCGCTAGGGGTTTTGCAATTCGGTTCATTTGAAGCGGTTGCTGAAGACAAGGAATTTGTTACCAATATCATGGACAAATTCCATTTCACTCATCATCTGGAAGCAAATATTACCCCTTTAAACTTGGGAACTGATTGTCAAGATTTGTCATTCTCAGACCTAATGCATAATTTGATGGACAGTTTGGACGAATCATATTCTGTTACAAAAAGTATATTGAAAACTGAAGTTTCAACTAGTACTGCTGCCCTCAATTCAAATGTTTCAAGGTTGAACCCAACAATGCTTTCATTTATTCAGGATGACTGTTGCTTTTCTAGAGAAAATCTACTAAAATCTCTGAAAATAGAAAATGAGATAGGTTCCTCATCATCTGAAATGCCAACTGTTCCAAGACATATCGATAAGGTGGGGACAAAACCAAATCATATGGAAGAAGAGATATGGTCCTGGTCTCACTTGCTCAACAATGTTGGAGTATTTGGAGAGATGTCAAATGGATTAGACTCTTTCTCCGTTATAAATACGACACAGAAACAACTTGGAGGGACTGAAACTGTTCATGATGCTAAGAATGTGAATGACTTCGCTTTTCCCTCAGAGTCTGAATTACACAAAGCACTTGGATCAGTTGGATATGGAGAGACAGGCGAATTTATGTCAAAATGTATCCCTGTTGAGGAAACATACAGTAACTCAACTCTTGTAATCAACAAAAAAGAGCATGATCATATTAAAGGTTTGGAGTTTCCCAAAGATGTTGACCTGGAAGATCTTTTAGATGCTGTTGTTGGCAATTTATGTGGTGCCACTGATGATACTTCAAGTATATCCAACAGTATCAGGTCTCTTACAACCATGCCAACAGAGTTTACAGGTTCCGTTCAGCCTGAAAATTATTCAGAAGAAAGCACTTTGATTGTGGATAACTCAGATGTGAAAAATGATCTTATGCCTGCAGTTATGGTCAAGGGAAAAGATCAATTTTCTAACCATTATACATCATCTTTTGATGGAAATGCATGCTTATTGATTGATGAGGCGCGGCAGGAAAAGGCTAATAGTCATATGCAGCCTGTTGGTGGACCAAAGCTCTCTAGCACAAGCAAGAAAAGAACAAGAGTTGGTAACAACCAAAAGTCAAGGCCAAGAGATAGACAGCTGATCATGGACAGGATGAAGGAGTTAAGAGAACTTGTCCCGGAAGGTGGTAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTGTACTTGAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACGAATTGCCAATCGGGCGGTTCCTGAGTGCAAAAGACAGAAAGTCAATGCTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTCAACTATCATGGCCTATAGTCATAGAAGATCTGGAATGCTCAGGGCACATGCTCATAGAGATGATATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAGGTGATCCGAAAGCTTGATGTCACCATCTTGAAAGGGATCTTGGAAAACCGTTCCAGCAACAGTTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTCTGTGTCCTCTACTGCATCTTCTGCAGCTTAGGAGAAACCCTGTCTCATGTAAAAGCTGA 1923 0.4077 MEATSITQLLKGFCDHTQWKYAVFWKLDHHFPMVVGKIALSRDHCWVSYEDILTGRFDTDLIPECPDEWLLQFACGIKTIVLVPVLPLGVLQFGSFEAVAEDKEFVTNIMDKFHFTHHLEANITPLNLGTDCQDLSFSDLMHNLMDSLDESYSVTKSILKTEVSTSTAALNSNVSRLNPTMLSFIQDDCCFSRENLLKSLKIENEIGSSSSEMPTVPRHIDKVGTKPNHMEEEIWSWSHLLNNVGVFGEMSNGLDSFSVINTTQKQLGGTETVHDAKNVNDFAFPSESELHKALGSVGYGETGEFMSKCIPVEETYSNSTLVINKKEHDHIKGLEFPKDVDLEDLLDAVVGNLCGATDDTSSISNSIRSLTTMPTEFTGSVQPENYSEESTLIVDNSDVKNDLMPAVMVKGKDQFSNHYTSSFDGNACLLIDEARQEKANSHMQPVGGPKLSSTSKKRTRVGNNQKSRPRDRQLIMDRMKELRELVPEGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRIANRAVPECKRQKVNASHPGRSCAFDFESQLSWPIVIEDLECSGHMLIEMICNEHGLFLEIAQVIRKLDVTILKGILENRSSNSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPVSCKS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1160 640 MobiDBLite consensus disorder prediction 438 470 - -
Gso7g1160 640 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 34 639 - -
Gso7g1160 640 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 34 - -
Gso7g1160 640 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Gso7g1160 640 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 34 IPR043561 GO:0003700|GO:0006355
Gso7g1160 640 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 34 639 IPR043561 GO:0003700|GO:0006355
Gso7g1160 640 MobiDBLite consensus disorder prediction 446 460 - -
Gso7g1160 640 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 113 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1160 Gso-Chr7 16173158 16179490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1160 260 634 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.414 3.11e-45 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1160 - - gmx:100820605 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1508 18 44716469 44722870 Gso7g1160 7 16173158 16179490 GST