Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1155 ATGGAGGAGGATCAATGTTGGATCAAGAGTAGGAGAAAGTACTCAATGAGCTCTAATCTTGACTCATCTACTAATTACCCCTCCTCCTATGATGACCACTCATCATGGGAAGAACAAGCCTTCGCAAAAGATGCAGCTAGGTCTGGTTGCACATGGCCACCTCGATCATATTCTTGTAGCTTTTGCAGAAGGGAATTTAGGTCAGCACAGGCTTTAGGCGGCCATATGAATGTTCATAGAAGAGATAGGGCAAGACTCAAGCAGCCATATAGCCCTCAGAATGAAATCCTAAGTGTTGATCTTGAGAAAATTACCACGCAACCCCTGAATTCAGTTCAGATTTCTTTTACTTCTTTGGGTTACTTATACCCATCTTCTCTTGGTGTATTGACCCATAATAACACTAACCCTAATTCTGATCCTTATTCTCATGCTCCTCCTTCACCTTCCAAGGTTTTAGTCTCATCAATCAATAAGAGAGGAAGAGAGAAACCCCAGATTCCGCTTTACAAAGGATGTCATGAGTCTTCTCCTGATCTTCCTTCTAAATCCATGTCAAATTTAACTGAAGACTTCAGATTTTGTTCACGTAGGCTCGATCCTGAAGCTGGTGTTGAGAAAAAATTGAAGGGATTGGATTCTAGGTGTGGGAGTACTGAGGGAGATGATGATAAAACGGACGTGGCTGTGAGCTTGAACTTGTTTATGAATCTAGCTCGCCCAACTGTGCAGTTTGAGACTAAGGAGAAAGATACAAGTTTCAAGAAGAGGAAAGAAGATGCTTCATCCATTCCATTCTTCCCCAAATCATGCTCTGTTGATAGGCTTCATATGCAGTCAAAGATGTTTGAATTGAGCCCTAGTTCCATAGAAGAGCTAGATCTGGAGCTAAGGCTTGGTTATAGGTCCATGGTATAG 918 0.4205 MEEDQCWIKSRRKYSMSSNLDSSTNYPSSYDDHSSWEEQAFAKDAARSGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPYSPQNEILSVDLEKITTQPLNSVQISFTSLGYLYPSSLGVLTHNNTNPNSDPYSHAPPSPSKVLVSSINKRGREKPQIPLYKGCHESSPDLPSKSMSNLTEDFRFCSRRLDPEAGVEKKLKGLDSRCGSTEGDDDKTDVAVSLNLFMNLARPTVQFETKEKDTSFKKRKEDASSIPFFPKSCSVDRLHMQSKMFELSPSSIEELDLELRLGYRSMV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1155 305 PANTHER OS07G0101800 PROTEIN 1 304 - -
Gso7g1155 305 Gene3D Classic Zinc Finger 44 107 - -
Gso7g1155 305 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
Gso7g1155 305 SMART c2h2final6 57 79 IPR013087 -
Gso7g1155 305 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 304 - -
Gso7g1155 305 MobiDBLite consensus disorder prediction 134 153 - -
Gso7g1155 305 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Gso7g1155 305 Pfam C2H2-type zinc finger 57 81 - -
Gso7g1155 305 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1155 Gso-Chr7 16091999 16093497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1155 27 88 C2H2 Transcription Factor Family AT2G37740 75.806 3.75e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso7g1155 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1155 - - gmx:100810800 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1502 18 44408752 44410043 Gso7g1155 7 16091999 16093497 GST