Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1139 ATGGTTGAGTCTGCCATGTCAAAGACAATGATGGAGGAAGTAGTAATGGCAAGTTCTTGGTCAGAGGGGTCAGAGGATGATGACCTTGTGAGAGAGCTTTTAGATGATGGGTCTCCCCTTCTTATTGAACCCCCCAACACAACAACAAAATTAGCCTCTTCAAGTGATGACCAAGACCAAGCCTTTAATAGGTTCATCTCCAACATTTACTCAGGACCTACCATCTCAGATATTGAAAATGCTTTGTCAGTGACCAACCAAAGAGATCACCACTTCCCACAACTCTCATCAGCCAGAGTTTCCATATTGGAAAGGGGTTTGAGTAAGATTGAGAATAAGTATACCCTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGAAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGCAGTGCCAAGAAGCAAGTTGAGAGATCCAATGAGGACCCTGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTACCCATATTTCCTCATGGGCCAACAACAGCAATCTCATTCCTACCCACCAATCAAGAAGTCCAAGCCCACCTCTCCACAGGCCCAGGACCAAACCCATAGAGCAGACTATGTTCATGAAGCCCATCAGACAGAAGAAGCCCAATCAAATGCTTCTATGGGTGTGATGCCATCATCCACTTCATTGGACTCTACACTAGACATGGCCCAAGAAAGTTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTCGGAACCCCTCAAACAATGTCAATAGTGCTCATACAAAATTCTCTTGTTCTTCATACCGTTCTCCTCCAACATCACCTCTTTGGGCTTCAACTTACTCCACCACTTGCTATACCGTTGGCTTAAATTCTAGCACTTAG 954 0.4444 MVESAMSKTMMEEVVMASSWSEGSEDDDLVRELLDDGSPLLIEPPNTTTKLASSSDDQDQAFNRFISNIYSGPTISDIENALSVTNQRDHHFPQLSSARVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLMGQQQQSHSYPPIKKSKPTSPQAQDQTHRADYVHEAHQTEEAQSNASMGVMPSSTSLDSTLDMAQESLGSQGLLEDMVPFMVRNPSNNVNSAHTKFSCSSYRSPPTSPLWASTYSTTCYTVGLNSST* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1139 317 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 287 IPR044810 GO:0003700
Gso7g1139 317 Gene3D WRKY domain 122 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g1139 317 SUPERFAMILY WRKY DNA-binding domain 124 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g1139 317 MobiDBLite consensus disorder prediction 197 220 - -
Gso7g1139 317 ProSiteProfiles WRKY domain profile. 121 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1139 317 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 23 287 - -
Gso7g1139 317 Pfam WRKY DNA -binding domain 127 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1139 317 SMART WRKY_cls 126 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1139 317 MobiDBLite consensus disorder prediction 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1139 Gso-Chr7 15869961 15873392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1139 57 274 WRKY Transcription Factor Family AT5G43290 45.494 4.51e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso7g1139 WRKY 6.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1139 - - gmx:100810459 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1481 18 43824609 43828448 Gso7g1139 7 15869961 15873392 GST