Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1134 ATGCAAAGATTAATGATAATGGATCCGCGTCTTTGTGGTCCCCCTAATGAAATCCAGTTGGGGAATCAGAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGAATTTGGTTACCTGCAGTCCAATCTAGTACCAACTGACACACCTTCTTCATCTTCGGTTTGGACTCATGAGGAACCTTCTCCGGAGGATTGTGAATTTTCTGATGGAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGCGGCAAGATTCTTTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTGATTGGCGAAAAGTACCCTTCTACGCCTTTAGGGCATCCAAGTTCTGTTGATCCAGATGATGGTAGTGGGGAGCATAATTTATCTGAAAACTATGGTACTTGTTCTTACAATGATGGTGACCTCAGTAGCATTTTTACTAACAATTTTTTGCGACGAAATTTGGGGGAACTTCCTAACCAGAATTTTCGAGGCAATAGCATTTCACAGTCATCTTATAGCTCTTCAAACAGTGTGAAAAGTAGTGTGGAAGGGCCTGTGGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGACTCAATCCATTTTGCTATTTCAGAAGGGTGTTGAGGAGGCTAGCAAGTTTCTTCCAAGTGGAAATGGACTCTTTGCTAATTTGGATGTGGCTAATTTTTCAAAACTAAAGCCTCGAGTGGGGAGTGATGAATTGCCTGTTAAGGTGGAGAAGGACGAGGGTGAGTCTTTTCCTGCTGGATCCAAAATAAGGAAGCACCATCACATGGAAGAGGAGGATGTTGAAGAAAATAGAAGCAGCAAGCAAGCTGCAATTTTCTCTGAACCTACATTGCGATCATCCATGATTGATATAATCCTGCTTCATAGTTTAGGGGATGGTAAGAAGCATTTTATGGCCCGCCGTGAGGCTTTGCAAACCAAGAATGACCAGATAGTGGTGTCAAATGGTAAATCAAAGGCTTCCAATGGTGGCAAGGGGCGTAGTAAGAAACAAAACGGGAAAAAGGAAGTGGTAGATTTGAGAACACTTTTGGTTCTTTGTGCACAGGCTGTTGCAGCAGATGACTATAAAAGCGCGCATGAGTTGCTAAAACGGATCAGGCAGCACTCAAACCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCCCGCTTGGCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCTTATCATCTATATCTTGCTGCTTGCCCTTTTAGGAAGATGACTGCTTTTATCTCTAATGTTACAATAAGGAAATCTTCAGCAAATTCACCAAGGCTCCATATTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATTCAGAGACTTTCACTAGCAGGAGGAGCACCTAAACTTCGGATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGATGCCGCTTGGCAGCATATGCTGAATCGTTTAAGGTGGAATTTGAGTACAATGCTATAGCGAAAAAATGGGAAACAATTCAACTCGAGGAACTCAAGATTGATAGGGACGAGTACCTTGTTGTGACCTGTTTTTATCGCTGTAAAAATGTGCTGGATGAATCTGTGGTTGTGGACAGTCCAAGGAATAAATTCCTCAGTTTGATAAGGAAGGTCAACCCGAATATATTCATTCATGGCATTACTAACGGGGCCTTTAATGCGCCTTTCTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTCTTTGACATGCTTGAAACCATTGTGCCTCGTGAGGAATGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGCAGGGAAGCATTGAATGTCATAGCTTGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCGCGAATTCTAAGGGCTGGATTTTTGCAACAACCTTTTGAGCGTGAGATAGTAAAGAGGGCAATAGAGAAAGTAACGACTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAATGGTTGTTGCAAGGTTGGAAGGGGCGAATCATTTATGCCCTTTCTTGTTGGAAACCTGCATGA 2205 0.4245 MQRLMIMDPRLCGPPNEIQLGNQRFENGFFDQSREFGYLQSNLVPTDTPSSSSVWTHEEPSPEDCEFSDGILSYISQILMEEDMEDKTCMRQDSLDLQIAERSFYEVIGEKYPSTPLGHPSSVDPDDGSGEHNLSENYGTCSYNDGDLSSIFTNNFLRRNLGELPNQNFRGNSISQSSYSSSNSVKSSVEGPVDSPSSILQVPDLNSETQSILLFQKGVEEASKFLPSGNGLFANLDVANFSKLKPRVGSDELPVKVEKDEGESFPAGSKIRKHHHMEEEDVEENRSSKQAAIFSEPTLRSSMIDIILLHSLGDGKKHFMARREALQTKNDQIVVSNGKSKASNGGKGRSKKQNGKKEVVDLRTLLVLCAQAVAADDYKSAHELLKRIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMTAFISNVTIRKSSANSPRLHIIDFGILYGFQWPTLIQRLSLAGGAPKLRITGIDFPQPGFRPAERIVETGCRLAAYAESFKVEFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRCKNVLDESVVVDSPRNKFLSLIRKVNPNIFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREEWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQPFEREIVKRAIEKVTTSYHKDFVIDEDSQWLLQGWKGRIIYALSCWKPA* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1134 734 MobiDBLite consensus disorder prediction 259 287 - -
Gso7g1134 734 Pfam GRAS domain family 362 732 IPR005202 -
Gso7g1134 734 MobiDBLite consensus disorder prediction 167 201 - -
Gso7g1134 734 ProSiteProfiles GRAS family profile. 353 732 IPR005202 -
Gso7g1134 734 MobiDBLite consensus disorder prediction 259 288 - -
Gso7g1134 734 MobiDBLite consensus disorder prediction 334 355 - -
Gso7g1134 734 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 35 733 IPR005202 -
Gso7g1134 734 MobiDBLite consensus disorder prediction 111 137 - -
Gso7g1134 734 MobiDBLite consensus disorder prediction 334 349 - -
Gso7g1134 734 PANTHER SCARECROW-LIKE PROTEIN 9 35 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1134 Gso-Chr7 15804107 15807770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1134 63 733 GRAS Transcription Factor Family AT2G37650 53.285 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso7g1134 GRAS 2.9e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1134 - - gmx:100807788 1447.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1477 18 43689268 43693078 Gso7g1134 7 15804107 15807770 GST