Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1129 ATGAAGGATAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTACTACGCGCATATGTCAAACAGTATGGTCCTAGGGAATGGAATCTGGTGTCTCAGCGCATGAACACACCTCTTAACAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATTAAGAAAGGATCTCTTACAGAGGAAGAGCAGCGTCTAGTCATCAACCTTCAAGCAACACACGGCAACAAGTGGAAGAAAATTGCAGCACAAGTCCCTGGTCGCACAGCAAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAAAGGGAAACAAAGGGGAATAACTGCACCATTGACCCAATTAACGATAGCAAGTACGAGCATATCCTTGAGAGTTTTGCAGAGAAGCTAGTGAAAGAAAGGCCTTCAACATCAACATCAACATCATTTGTTATGGCTACTTCCAACAGTTCTTTTCTGCATGCTGATGCACCGGCTCCTGCACCAGCCTTGCTTCCGTCTTGGCTTTCCAATTCCAATGGCACTGCACCTGTGAGGCCACCCTCCCCTTCTGTGACTCTTAGTCTTTCTCCCTCGACGGTGGCAGCGCCTCCTCCATGGATGCAGCCCCCCGTCAGAGGACAGGACAATGCTAGTCCTCTTGTTTTGGGGAATGTGGCGCCTCACGGGGCCGTTCTAGCATTTGGTGAGAACATGGTGATGTCTGAGCTAGTGGAGTGCTGCAAGGAGTTGGATGAAGTGCATCATGCTTTGGCCGGGCATAAGAAGGAGGCAGCATGGCGGTTAAGCAGGGTGGAGCTGCAGTTGGAGTCTGAGAAGGCTGGGCGAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAAATCAAAGCTCTGAGGGAGGAGCAAACGGCTGCATTGGATAGAATTGAAGCAGAATATAGGGAGCAGTTGGCAGGGCTGAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGACTTACTAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAG 1086 0.4982 MKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVINLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGNNCTIDPINDSKYEHILESFAEKLVKERPSTSTSTSFVMATSNSSFLHADAPAPAPALLPSWLSNSNGTAPVRPPSPSVTLSLSPSTVAAPPPWMQPPVRGQDNASPLVLGNVAPHGAVLAFGENMVMSELVECCKELDEVHHALAGHKKEAAWRLSRVELQLESEKAGRRREKMEEIEAKIKALREEQTAALDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHLRLTKFLEQVGCRSRLTEPNGR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1129 361 Gene3D - 62 124 - -
Gso7g1129 361 Gene3D - 4 58 - -
Gso7g1129 361 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 361 - -
Gso7g1129 361 CDD SANT 6 53 IPR001005 -
Gso7g1129 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Gso7g1129 361 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Gso7g1129 361 SMART sant 3 55 IPR001005 -
Gso7g1129 361 SMART sant 58 106 IPR001005 -
Gso7g1129 361 Coils Coil 281 308 - -
Gso7g1129 361 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Gso7g1129 361 Coils Coil 310 330 - -
Gso7g1129 361 PANTHER TRANSCRIPTION FACTOR AS1 1 361 IPR031055 GO:0005634|GO:0006351|GO:0010338
Gso7g1129 361 Pfam Myb-like DNA-binding domain 7 67 - -
Gso7g1129 361 CDD SANT 63 104 IPR001005 -
Gso7g1129 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Gso7g1129 361 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1129 Gso-Chr7 15675134 15678117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1129 1 352 MYB Transcription Factor Family AT2G37630 65.753 4.11e-159 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g1129 Myb_DNA-bind_6 3.4e-14 CL0123