Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1127 ATGGCTGAGGTGGTGAAATCAGAGGAGTGTTGTCAGGAGAATAAGCAATCTACTGCTGCTTCTTGCTCCTCTGTATCCGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCGGGGAGATGTAGCCCTGCATCCACATCGCCCTCACATCGGAGGACCACCGGCCCTATAAGGCGTGCTAAGGGCGGTTGGACTGCACAAGAAGATGAGACATTAAGGAATGCTGTTGCAGTTTTTAAGGGAAAGAGTTGGAAGAAAATAGCTGAGTTTTTTCCTGATAGATCAGAAGTTCAGTGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGTCAAAATATGGGCCTACAAAATGGTCTTTGATAGCCAAGTCTTTACCTGGTCGAATAGGCAAACAATGTCGAGAGCGGTGGCACAATCATCTTAATCCTGACATAAAGAAGGATGCCTGGACTTTGGAAGAGGAATTGGCCCTGATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCATGGAAGGACTGATAATGCAATAAAGAATCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTAGCTACAGGAAGACTTCCACCAATTCCTAAGAATAGTCCACAAGTTCCTGTCAAAGATACAATTAGACGTTCTGCTAGTAAATCAATGCTTGGTTGTTCAAATAAAGAATTAAATGCAGCTGTTGAAACATCATCTGAAACTACAGCCATTAGTAAGCTAGATGACAGTGGCAGGAATCAGTTTGAGTCCTCAGGCACAGTTAGAGAAGTTGGTGATTCTTCAAGTGTTCCTGCAAATGACTCTGCCGATTCTGACTGTGTAGAATGCAAGCCTGGATCATCCAACATCAACCCCAGCTGTAGCAACTCAGAACACGTGTCAAGAGCTAATTTTGGAACAACTTTTGGGCCAATATCTGAGAATTCTGGACTCAATGGAAACTCAACTTTTGAGCATTGTACAAACAATGGTGACAGGAGCAGTACCAGGTTAATCGGAACATCTTCACAAGAAAATCCAACCTGTGGTTCTTTGTGTTATGAGCCACCACAGTTAGATGGTTCAGTTCCCATAGATTCTCTTTATTTAAATTATACTTGCCAGCAGAATGAGTACTGTCCGAGTCCAACGATGTCACCTACTGGTTTCTTCACTCCACCTCGTGCGAAGGGTAGTGAATTATGCACTGAGACACCTGAATCGATCTTGAGAAAGGCTGCTAATACTTTTCCAAATACTCCTTCCATATTGAGGAGGAGAAGAACTGGGGCCCAAACACTCACCAGTCCCACTAAAGTTTTGAAAGTAGATAATAATCCACATACTTCTAATAAAACAGAGAGAACCAATGATGATTCTGGTTCTGGGCATTTCTCCGGGAGTCCAGCAAGCCATGGCTATGGGATTGGCATTCCCAACAATAAGGCATTCAATGCATCTCCCCCATACAGGTTAAGATCCAAGCGAACAGCAATTGTCAAGTCAGTGGAGAAACAACTGGAGTTTGCATTTGACAAAGAGAAGAATGACGACAAGAGGAGTAATGTGATGACTGAAGATCGTCTGCATGAAAAAAAATTGGTTGTGACATAG 1683 0.4272 MAEVVKSEECCQENKQSTAASCSSVSEGSGSAIHKSPGRCSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAVFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKLDFYLATGRLPPIPKNSPQVPVKDTIRRSASKSMLGCSNKELNAAVETSSETTAISKLDDSGRNQFESSGTVREVGDSSSVPANDSADSDCVECKPGSSNINPSCSNSEHVSRANFGTTFGPISENSGLNGNSTFEHCTNNGDRSSTRLIGTSSQENPTCGSLCYEPPQLDGSVPIDSLYLNYTCQQNEYCPSPTMSPTGFFTPPRAKGSELCTETPESILRKAANTFPNTPSILRRRRTGAQTLTSPTKVLKVDNNPHTSNKTERTNDDSGSGHFSGSPASHGYGIGIPNNKAFNASPPYRLRSKRTAIVKSVEKQLEFAFDKEKNDDKRSNVMTEDRLHEKKLVVT* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1127 560 MobiDBLite consensus disorder prediction 260 305 - -
Gso7g1127 560 CDD SANT 166 209 IPR001005 -
Gso7g1127 560 Gene3D - 165 235 - -
Gso7g1127 560 Gene3D - 59 111 - -
Gso7g1127 560 ProSiteProfiles Myb-like domain profile. 55 106 IPR001005 -
Gso7g1127 560 PANTHER MYB-RELATED PROTEIN B-LIKE 19 482 - -
Gso7g1127 560 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Gso7g1127 560 CDD SANT 63 106 IPR001005 -
Gso7g1127 560 SUPERFAMILY Homeodomain-like 109 205 IPR009057 -
Gso7g1127 560 SMART sant 59 108 IPR001005 -
Gso7g1127 560 SMART sant 111 160 IPR001005 -
Gso7g1127 560 SMART sant 163 211 IPR001005 -
Gso7g1127 560 MobiDBLite consensus disorder prediction 450 470 - -
Gso7g1127 560 Gene3D - 112 163 - -
Gso7g1127 560 Pfam Myb-like DNA-binding domain 164 207 IPR001005 -
Gso7g1127 560 Pfam Myb-like DNA-binding domain 112 158 IPR001005 -
Gso7g1127 560 Pfam Myb-like DNA-binding domain 60 106 IPR001005 -
Gso7g1127 560 PANTHER MYB PROTEIN-RELATED 19 482 - -
Gso7g1127 560 CDD SANT 114 158 IPR001005 -
Gso7g1127 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 106 IPR017930 -
Gso7g1127 560 MobiDBLite consensus disorder prediction 11 31 - -
Gso7g1127 560 MobiDBLite consensus disorder prediction 1 65 - -
Gso7g1127 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 213 IPR017930 -
Gso7g1127 560 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Gso7g1127 560 MobiDBLite consensus disorder prediction 450 497 - -
Gso7g1127 560 ProSiteProfiles Myb-like domain profile. 107 158 IPR001005 -
Gso7g1127 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 162 IPR017930 -
Gso7g1127 560 MobiDBLite consensus disorder prediction 38 52 - -
Gso7g1127 560 MobiDBLite consensus disorder prediction 260 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1127 Gso-Chr7 15636702 15646109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1127 5 552 MYB Transcription Factor Family AT3G09370 49.020 4.08e-158 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g1127 Myb_DNA-bind_6 4.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1127 K09422 - gmx:100793280 1139.41