Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1120 ATGTCCCCAGCAGGTTCACCAAGATGGAGCCCTACCACAGAACAGCTCATGATCTTGGAGGAACTGTACAGGAGTGGCATTAGAACTCCTAGTGCATCTCAAATTCAGCAAATTACTACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGCTCAGAAGGAAACTCACCAAGCAACTGCAGCTACAGCAGCAACAACAACAACAGCTCCAACTCCACCATCATTGCCCAAAACTCAATCAAGATCATTTCACTAACCATTTTGTTGGTAACTTTGGTTATAGCACTCTTCGTTCTACTACCCACGATTTTCCCTTTTTTAACCCACCTAGCTTGCTTTTTCAGGGAGGTGCTGCGAACACATCGTCAGAACAAGCATTGAGTTGCAAATGGAATGTGCATAACCCTCAAAGTAATTTGGTGGAGAGTAAAGAGATGGCATTCTGCAACTATGGTTGGACACTTGTGGATGTTGATAATAATCAAGCATCTTCATGTTGCACCACTCGACCTGTCAAGACTCTTGATCTCTTTCCTCTCACAACTACCAGAATCAGTGAAGACTGCACCACACCACCCAAGTAG 633 0.4408 MSPAGSPRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQQQQLQLHHHCPKLNQDHFTNHFVGNFGYSTLRSTTHDFPFFNPPSLLFQGGAANTSSEQALSCKWNVHNPQSNLVESKEMAFCNYGWTLVDVDNNQASSCCTTRPVKTLDLFPLTTTRISEDCTTPPK* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1120 210 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 207 - -
Gso7g1120 210 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 207 IPR044555 GO:0003700|GO:0099402
Gso7g1120 210 Coils Coil 65 89 - -
Gso7g1120 210 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Gso7g1120 210 Gene3D - 3 67 - -
Gso7g1120 210 SMART HOX_1 4 71 IPR001356 GO:0003677
Gso7g1120 210 CDD homeodomain 7 67 IPR001356 GO:0003677
Gso7g1120 210 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Gso7g1120 210 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1120 Gso-Chr7 15555908 15557626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1120 1 206 Wox Gene Family AT2G28610 36.777 4.03e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso7g1120 Homeodomain 7.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1120 - - gmx:102662354 400.593