Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1117 ATGGCACTACTAGTCCTCACTTCTTTTATAATTTCATTCACATTATTATCATTTATGATTGTGATGATCAGTGCTTCAGACACAGAATCTCTCCTCAAATTCAGAGACTCCCTTGAAAACAACAACGCGTTGTTGTCCTCATGGAATGCATCCATCCCTCCATGTTCAGATGATGATGCATCATCCCACTGGCCTCACGTTCAGTGTTACAAGGGACACGTCTGGGGTTTGAAGCTGGAGAGCATGAGGCTCAAAGGTGTCATTGACGTCCAGTCCCTCCTGGATTTACCGTATCTCAGAACCATAAGCCTCATGAACAATGACTTCGACACTGCATGGCCTGAAATCAACAAGGTTGTGGGTTTGAAGACCATTTTCCTTTCAAACAACAAGTTCTCCGGGGAGATTCCGGCTCAGGCTTTTCAGGGCATGCAATGGTTGAAGAAGATTCATTTGTCAAACAACCAGTTCACAGGTCCTATTCCAACTTCCCTCGCATCCATTCCTAGGCTTATGGAGTTGAGGTTGGAGGGTAACCATTTCACCGGCCCCATTCCCAATTTTCAACATGCATTCAAATCATTTAGCGTAGCCAATAATCAATTAAAGGGAGAAATACCAGCCAGCCTCCATAACATGCCAGCTTCATCTTTCTCTGGTAATGAAGGGGTATGTGGAACACCGTTAAGTGCATGCTCCTCCTCCAAAAAGAAATCAACCGTGATTTTTGTTGTGGCTGTGGTTCTTGTTATTTTTGGACTGATAGTGATTGGAGCAGTAATATTGTTAGTCCTGCGTCGTCGAAGAAGAAAACAAGCTGGGCCAGAAGTGGCTTCTGCGGAAGAAGCAGGGTCAGATAAAGGAAGTAGGATGTGGATGCATAGTAGCTCCTCGAGCCACGGCAAGAGACGCTTCAGGTTATCATTTATGAGGGATGAAAGAGATGATTTTGATTGGCGGGATCTGCTGAAATCCTCAGCAAGGATTTTGCGCAGCGATGGTTACAGCTCTTCCTGCAAGGCTGTTCTGTTGGATGGGACTGAGATTGTGGTGAAGAAATTCACGCAGATGAACAATGTAGGGAGGGACGAGTTTCGGGAGCACATGCGACGGATTGGAAGCTTCAATCATCCTAATCTCCTTCCTCTCGTCGCCTACTACTGCATAGAGGAGGAGAGAGTCTTGATTACCGACTTTGTTCCCAATGGAAGCTTGGCTGCTCGCCTTCACGGATCCCAACCTGTAGGACAAGCAAGCCTGGATTGGGGAAGCCGGTTGAAGATAGTGAAAGGCATAGCAAAAGGACTTGAGAATCTGTACAGTGAGATGCCAAGCCTAATTGCGGCACATGGGAATCTAAAGTCCTCCAACGTTCTTTTGAGTGAATCTTTGGAGCCACTCCTCACAGACTATGGGTTGTTACCAGTGATAAACCAGGACAGTGCTCCTAAGATGATGTTCATCTACAAGTCCCCGGAGTATGTGCAGCATGGCCGCATCACAAAGAAGACTGATGTGTGGAGTCTTGGGATACTCATCTTGGAGATTCTCACTGGCAACTTCCCTGATAACTTTCTACAAGACAAAGGAAGTGATCAACAGAATTTGGCAAATTGGGTGCATTCACAAGAGTGGACTAGTGAGATGTTTGATAAGGACATGATGATGGAGACAAACAATAACAACAGCGAGGGGGAGATGATCAAGCTTTTGAAGATTGCATTGGCATGCTGTGAATGGGATGAGGACAAGAGATGGGACTTAAAAGAAGCTGTACAAAGAATTCATGAGGTCAACGAGGAGGACGATAATGGCCATGACTCAGATGGCGAAGTCACTATCTCCATAGAATAA 1854 0.4563 MALLVLTSFIISFTLLSFMIVMISASDTESLLKFRDSLENNNALLSSWNASIPPCSDDDASSHWPHVQCYKGHVWGLKLESMRLKGVIDVQSLLDLPYLRTISLMNNDFDTAWPEINKVVGLKTIFLSNNKFSGEIPAQAFQGMQWLKKIHLSNNQFTGPIPTSLASIPRLMELRLEGNHFTGPIPNFQHAFKSFSVANNQLKGEIPASLHNMPASSFSGNEGVCGTPLSACSSSKKKSTVIFVVAVVLVIFGLIVIGAVILLVLRRRRRKQAGPEVASAEEAGSDKGSRMWMHSSSSSHGKRRFRLSFMRDERDDFDWRDLLKSSARILRSDGYSSSCKAVLLDGTEIVVKKFTQMNNVGRDEFREHMRRIGSFNHPNLLPLVAYYCIEEERVLITDFVPNGSLAARLHGSQPVGQASLDWGSRLKIVKGIAKGLENLYSEMPSLIAAHGNLKSSNVLLSESLEPLLTDYGLLPVINQDSAPKMMFIYKSPEYVQHGRITKKTDVWSLGILILEILTGNFPDNFLQDKGSDQQNLANWVHSQEWTSEMFDKDMMMETNNNNSEGEMIKLLKIALACCEWDEDKRWDLKEAVQRIHEVNEEDDNGHDSDGEVTISIE* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1117 617 Gene3D Transferase(Phosphotransferase) domain 1 400 614 - -
Gso7g1117 617 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Gso7g1117 617 Pfam Leucine rich repeat N-terminal domain 25 69 IPR013210 -
Gso7g1117 617 Gene3D Phosphorylase Kinase; domain 1 300 399 - -
Gso7g1117 617 Pfam Protein kinase domain 338 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1117 617 ProSiteProfiles Protein kinase domain profile. 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1117 617 Gene3D Ribonuclease Inhibitor 26 191 IPR032675 -
Gso7g1117 617 SUPERFAMILY L domain-like 25 213 - -
Gso7g1117 617 SUPERFAMILY Protein kinase-like (PK-like) 328 596 IPR011009 -
Gso7g1117 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 606 - -
Gso7g1117 617 MobiDBLite consensus disorder prediction 274 297 - -
Gso7g1117 617 Gene3D Ribonuclease Inhibitor 192 233 IPR032675 -
Gso7g1117 617 PANTHER LRR RECEPTOR-LIKE KINASE 9 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1117 Gso-Chr7 15533313 15536173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1117 15 607 Receptor kinase-like Gene Family AT5G35390 46.349 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso7g1117 Pkinase 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1117 - - gmx:100802475 1145.95