Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1110 ATGATGAAAATTCGAAAACAAGATCGTTTTTTTAGATTCTTGGTTCTTTTTCTACCCTTCCAGCATTTCCACCCTTTCTTTATTCAACTTGGTTATTTCGTGATCCTTTCTCTGGTAGGTTACTTGGGTCTCAAGGTCTCAAAGCCAAGGACCCCCGTTATACCAAATGACTTGAACCTCTTTTACACCTCTGTTTCTGCTTCCACTGTTTCTAGCATGGTTGCCCTTGAAATGGAGCTTTTCTCCAATTCCCAACTCATTCTCCTCACCCTTCTCATGTTTCTCGGCGGGGAAGTTTTCACTTCCATGCTCGACCTTCTATTTGCTACCTACAAATTCCAAAACAGATCAGTTATCAGCACCAATCAAATAGAACTTGGTTTAGTTTCTATTCCTGACTCAAAATCAGAAAATTACCACAAACCGAGTGATGATAGTAATATTAACGACGACAGTGATAGACTTAAGTATAACTGTCTTAGTTATCTGACTTTTGTAGTTTTAGGTTACCTAGTGGTGGTTCAATTTGTTGGCTTTAGTTTCGTGTCTTTGTACATAACTTTGGTACCGAGTGCAAGACAAGTACTGAAAAACAAAGGCATTAAGATTGTAACGTTTTCTTTGTTTACCATAGTTTCCACGTTTGCTAGTTGTGGTTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGACTTCTTCTCCTTGTCCTCCCACACATCCTTCTAGGTAACACCCTTTATCCACCATGTTTGAGGCTTCTGATAATGGTTTTGAAAAAGGTTACAAAAAAAGAGGAATTCTCGTACTTGCTGAAGAATTTCAAAGACGTGGGTTATGATCATATGCTCTCTGCTCTTCATTGTTGCCTCCTGGTTGTTACTGTCTTGGGTTTCAATCTTATACAATTTGTGATGCTTTGCTCTTTGGAGTGGAACACCAAAATCATGGAGGGTTTGAATGTGTATGAGAAAGTGGTGGCGTCTTTATTTCAAGTAACAAATGCGAGACACGCTGGTGAATCTGTTTTTGATCTCTCATCCATCTCTTCAGCCATATTAGTACTCTTCGTTGTTATGATGTACCTCCCACCATACACTACATTTATACCAGTAAGAGAGCACGAAAATGATGTCAAGAGAAACAAAAAAAGCGTAGTGGAGTGTCTTGTATTATCTCAACTCTCTTACTTGGTCATTTTCATTATTCTGATTTGCATCACTGAGGGTAAGAGCTTAAAAGAGGATCCCCTCAACTTTAATGTGTTTAACATCACCTTAGAAGTCATCAGTGCTTATGGGAACGTAGGGTTCTCAACGGGATACAGCTGCGCTAGGCAAATGAAAGCCGATGCCATGTGCAAAGATTCATGGGTTGGATTCTCGGGTAGGTGGAGTAGCAAAGGCAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAACTCAACATGAAAGGTGGCAAAGCCTGGAACCTCTCCTAA 1500 0.402 MMKIRKQDRFFRFLVLFLPFQHFHPFFIQLGYFVILSLVGYLGLKVSKPRTPVIPNDLNLFYTSVSASTVSSMVALEMELFSNSQLILLTLLMFLGGEVFTSMLDLLFATYKFQNRSVISTNQIELGLVSIPDSKSENYHKPSDDSNINDDSDRLKYNCLSYLTFVVLGYLVVVQFVGFSFVSLYITLVPSARQVLKNKGIKIVTFSLFTIVSTFASCGFVPTNENMMVFKKNSGLLLLVLPHILLGNTLYPPCLRLLIMVLKKVTKKEEFSYLLKNFKDVGYDHMLSALHCCLLVVTVLGFNLIQFVMLCSLEWNTKIMEGLNVYEKVVASLFQVTNARHAGESVFDLSSISSAILVLFVVMMYLPPYTTFIPVREHENDVKRNKKSVVECLVLSQLSYLVIFIILICITEGKSLKEDPLNFNVFNITLEVISAYGNVGFSTGYSCARQMKADAMCKDSWVGFSGRWSSKGKFILILVMFFGRLKKLNMKGGKAWNLS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1110 499 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 12 499 - -
Gso7g1110 499 PANTHER SODIUM TRANSPORTER HKT1 12 499 - -
Gso7g1110 499 Pfam Cation transport protein 388 485 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gso7g1110 499 Pfam Cation transport protein 153 370 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1110 Gso-Chr7 15461180 15465606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1110 45 496 Inorganic Solute Cotransporters AT4G10310 51.299 2.11e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1110 K24976 - gmx:100800875 919.457