Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1097 ATGGCGTTGGGCATGAGCAGGTTCAAGAGGGAGCAATGCAACCGCACAAAACATGATTCTAGCTTCTCCCATTGGAAGATTCTGATTGGCCCTCGTGATTGGGAAGACCATTCGAAAGGAAAGGAAGGGTGTTCAAAGTACAGGATTCATAACCTCCCACAACAATCGGGTCCAGGAGTCTATGAGCTTGGAATAGCTGCTGCGGCATCAGTGTCAGAGCGTAAAATTTACAAGCTTGTCCCTCACCGTCACCGCATAGTGGTTGTTTACCTCGGACAAACTGAAAATGTGAGAGAACGACTCCGGCGTTATGGCGGAAATGGGGACCACTTGGAGGATTCTTCTCTCCACTTGTTTCAGCAAGTCTTTTCACAAGGATTCTCAATCCTTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCCCTGCGAACAGAAACTGAGCTGCTCAGTACATTTGATTATGCATGGAACACAAGAAGTAATTGTGTCCGGAGGCCTGATGATATTCTTCAAAAGCTCCATCAAATTGCTTCAGGCACTAGAACACTTTCAGATATTGCCAGAGCTCTTCTGCCTTTCACTCAGAAGCAAGTGGGCATCCAAATTAAATCAATCAAGTTAGATGAAGCAGACAATGGCAGCAGCTATAACAATCTCCTATCTCGACTATTCAGCTTTAACAGATCTCGTCCTAGGTTAGTTCAAGATATCACTGGTGCCATTCAGGAACAAGAGAATGGTAAAATTTGTGGAGTGGCGCTGGGTGATGGTTCAATTTGTACAAGGCCACCAGCTGAAAAACGAATGAGGTGTCCTGAACACAAAGGAATGAGAACAAATGTGTCCACTGCCAAAGCAATAATAGGGGCACCCATGTCAGAGAGCCATGATTTAGAAGACCCTCCTCAAACAGTGGTTGATGAAAGTCTCACAAACACAGATTATATATGTGGAATCCTCTTAAGTGATGGCTCCACCTGTACAAGACAACCAGTTAAAGGAAGGAAAAGGTGCCATGAGCACAAAGGGAGGAGAATTCGTGCAGCATCTATTCAAACAAAGGACAATGGATACAAATACCAAAATAATGTCAGCAATGATGTGGAAGACCCTCCACAAACACTTGTTGATGAGAGTATCACAAACACCAATATATGTGGAATCATATTAAATGATGGCTCCACTTGTACAAGACATCCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGAGGAGAATTCGTGCATCTTTTCATATAGCAAATAAAAAATAA 1281 0.4333 MALGMSRFKREQCNRTKHDSSFSHWKILIGPRDWEDHSKGKEGCSKYRIHNLPQQSGPGVYELGIAAAASVSERKIYKLVPHRHRIVVVYLGQTENVRERLRRYGGNGDHLEDSSLHLFQQVFSQGFSILYRWAPMQNKEDALRTETELLSTFDYAWNTRSNCVRRPDDILQKLHQIASGTRTLSDIARALLPFTQKQVGIQIKSIKLDEADNGSSYNNLLSRLFSFNRSRPRLVQDITGAIQEQENGKICGVALGDGSICTRPPAEKRMRCPEHKGMRTNVSTAKAIIGAPMSESHDLEDPPQTVVDESLTNTDYICGILLSDGSTCTRQPVKGRKRCHEHKGRRIRAASIQTKDNGYKYQNNVSNDVEDPPQTLVDESITNTNICGIILNDGSTCTRHPVKGRKRCHEHKGRRIRASFHIANKK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1097 426 Pfam GIY-YIG domain-containing protein 22 171 - -
Gso7g1097 426 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 5 360 IPR038909 GO:0003677|GO:0006355
Gso7g1097 426 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 302 423 IPR038909 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1097 314 425 HRT Transcription Factor Family AT5G56780 39.831 6.29e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Gso7g1097 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1097 - - gmx:100784450 874.389