Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso7g1084 | ATGGCAAGTTCAATCGGGTGCATACTGTTGTTGACACTTTGTGTTGTCCTCGTAGCTTTAGTTCATGCACAGCAACAAATAGGCTTCATAAGCATTGATTGCGGGAGTAGTCCACCAAATAATGAGTACACAGATGACATAACTAAAATAAGGTACACCACTGATGGAGCCTATATACAAACTGGGGTTAATAAGAATATCTCCTCTGAGTATGCATACCCAAAGAATCCGAATCTGCCACTACCACTCTCAGATCTCAGAAGCTTTCCTCAGGGAGAAAGGAACTGCTATAGGTTAGTAGCCGGAAGAAGAGGCAGTTTACATTTGATAAGGGCTTCCTTCTTGTATGGAAACTATGATGGAGTAAACAAGCCACCAGAGTTTGATCTCTATGTTGATGTCAAGTTTTGGTCAACAGTCAAATTTAGAAATGCCTCAGAAGAAGTTACTATGGAAATAATAAGTGTGGCAGAATCAGGTGTCACACATGTTTGCCTTGTGAATAAGGGAGCAGGAACTCCTTTTATCTCAGGATTGGAACTTAGACCACTTAATAGTTCTATTTATAGCACTGAGTTTGGGGAATCTGCTTCACTGTCACTTTTCAAACGATGGGACATTGGGTCACTCAATGGAAGTGGTAGATATGAAGATGATATTTATGATAGAATATGGTCCCCCTTCAATTCCTCATCCTGGGAATCTGTCAGCACTTCCACACCAATAAATGTCAATGATGATGGATTTAGACCACCATTTGAAGTCATTAGAACTGCTGCTAGACCAAGGAAAGGCAGTGATACTTTGGAATTTTCTTGGACCCCAGATGATCCGAGTTGGAAATTTTATGTCTACTTGTACTTTGCTGAAGTGGAACAGCTGGAGAAAACCCAACTGAGGAAATTCAATATATCTTGGAATGGATCTCCATTGTTTGATGATTCTCTAGTACCGCGCCACTTGTTTGCAACCACTCTTTCCAATTCAAAATCCTTGGTAGCAAATGAACATAGGATTTCTATCCACAAAACAAAAGATTCAACGCTTCCACCCATTCTTAATGCAGTTGAGATTTTCGTAGCAAGACAGCTAGATGCCCTTGCAACATTTGAACAAGATGTTGATGCTATTCTGTCCATAAAGGAAAGCTATAGAATTCAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACTATTCTTGGGAAGGCTTAAAATGCAACTATAGCACCTCACTTCCTCCCCGAATTATATCTCTGAATATGAGCTCTAGCAGTTTGAGTGGAATAATAACTTCTGCCATTTCCAATCTCTCCTCGTTGGAATCTTTGGACTTACATAACAATAGCTTAACTGGAACAATGCCTCAGTTTTTGGAAGAATTGAAATCCCTTAAATATTTGGATTTAAAGGACAATCAATTTTCAGGTTCTGTTCCTACCATTCTTGTAGAAAGATCAAGGGATGGATTACTCACGTTGAGAGTGGATGATCAAAATCTCGGTGACTCAGGAGGGAACAATAAAACCAAGGAAATTGTCATTCCCATAGTGGTATCAGTATCAGTTTTAGTTATAGTGGTTGCTTTCATTCTCTTTTGGAAACTTAGAAGAAATGAACGATCAGACGAGGAGATTAGTACGCTCAGCAAAGGAGGAACAACTGTAACAACGAAGAACTGGCAATACTCGTATTCGGAGGTCTTGGACATCACCAACAACTTTGAAATGGCAATTGGTAAGGGAGGATTTGGAACTGTGTACTGTGGGAAGATGAAAGATGGCAAACAAGTTGCAGTCAAGATGCTTTCTCCATCATCATCTCAAGGGCCAAAGGAATTTCAGACTGAGGCTGAGCTTTTGATGACAGTTCATCACAAAAATTTGGTATCCTTCGTTGGTTACTGTGATAATGATAACAAGATGGCACTCATATACGAGTACATGGCCAATGGCAGCGTGAAAGATTTTATCTTGCTCTCAGATGGAAATTCACATTGCTTGAGTTGGAAAAGGAGAATACAGATAGCAATCGATGCTGCAGAGGGGTTGGATTATCTACACCATGGATGCAAGCCACCTATTATACACAGGGATGTAAAGTCAGCCAACATTCTTTTAAGTGAAGACTTAGAAGCCAAGATAGCAGATTTTGGCCTCTCCAGGGAGTTTAGGACAGATAACCAAGATCAACAATCTCAAGTGATTCACAGTGATGCTACAAATGAAAAATCTGCAGTAATGGGCACAACAGGGTACCTTGACCCAGAGTACTACAAGTTAGGGACACTGAATGAGAAAAGTGACATCTACAGTTTTGGAATTGTTCTACTGGAATTACTCACAGGTCGCCCTGCAATATTAAAAGGCAACGGAATAATGCACATACTTGAGTGGATAAGACCTGAGCTTGAAAGACAAGATTTGAGTAAAATTATAGATCCAAGGCTACAAGGAAAATTTGATGCTAGTTCTGGCTGGAAAGCTTTAGGAATAGCAATGGCATGCTCTACATCAACCTCCACTCAGAGACCTACAATGAGTGTTGTGATAGCTGAGCTGAAACAGTGCCTGAAATTGGAATCCCCTAGTGATACTTCTGAAAAATTTGTGGCCCCTCCAAAACAAGTCTACGGCGAATTTTATAGTTCATCTGAAGCATTTTCCTATGATAGTCAATCTATGACCTATCCTTTCCCAAGATAG | 2706 | 0.4021 | MASSIGCILLLTLCVVLVALVHAQQQIGFISIDCGSSPPNNEYTDDITKIRYTTDGAYIQTGVNKNISSEYAYPKNPNLPLPLSDLRSFPQGERNCYRLVAGRRGSLHLIRASFLYGNYDGVNKPPEFDLYVDVKFWSTVKFRNASEEVTMEIISVAESGVTHVCLVNKGAGTPFISGLELRPLNSSIYSTEFGESASLSLFKRWDIGSLNGSGRYEDDIYDRIWSPFNSSSWESVSTSTPINVNDDGFRPPFEVIRTAARPRKGSDTLEFSWTPDDPSWKFYVYLYFAEVEQLEKTQLRKFNISWNGSPLFDDSLVPRHLFATTLSNSKSLVANEHRISIHKTKDSTLPPILNAVEIFVARQLDALATFEQDVDAILSIKESYRIQRNWVGDPCEPKNYSWEGLKCNYSTSLPPRIISLNMSSSSLSGIITSAISNLSSLESLDLHNNSLTGTMPQFLEELKSLKYLDLKDNQFSGSVPTILVERSRDGLLTLRVDDQNLGDSGGNNKTKEIVIPIVVSVSVLVIVVAFILFWKLRRNERSDEEISTLSKGGTTVTTKNWQYSYSEVLDITNNFEMAIGKGGFGTVYCGKMKDGKQVAVKMLSPSSSQGPKEFQTEAELLMTVHHKNLVSFVGYCDNDNKMALIYEYMANGSVKDFILLSDGNSHCLSWKRRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSREFRTDNQDQQSQVIHSDATNEKSAVMGTTGYLDPEYYKLGTLNEKSDIYSFGIVLLELLTGRPAILKGNGIMHILEWIRPELERQDLSKIIDPRLQGKFDASSGWKALGIAMACSTSTSTQRPTMSVVIAELKQCLKLESPSDTSEKFVAPPKQVYGEFYSSSEAFSYDSQSMTYPFPR* | 902 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso7g1084 | 901 | PANTHER | OS07G0107800 PROTEIN-RELATED | 8 | 861 | - | - | |
| Gso7g1084 | 901 | Pfam | Protein tyrosine and serine/threonine kinase | 576 | 854 | IPR001245 | GO:0004672|GO:0006468 | |
| Gso7g1084 | 901 | Gene3D | Transferase(Phosphotransferase) domain 1 | 650 | 872 | - | - | |
| Gso7g1084 | 901 | PANTHER | BNAC07G41790D PROTEIN | 8 | 861 | - | - | |
| Gso7g1084 | 901 | ProSitePatterns | Protein kinases ATP-binding region signature. | 579 | 601 | IPR017441 | GO:0005524 | |
| Gso7g1084 | 901 | CDD | STKc_IRAK | 579 | 856 | - | - | |
| Gso7g1084 | 901 | SUPERFAMILY | L domain-like | 390 | 483 | - | - | |
| Gso7g1084 | 901 | Gene3D | Phosphorylase Kinase; domain 1 | 579 | 649 | - | - | |
| Gso7g1084 | 901 | Pfam | Malectin-like domain | 32 | 359 | IPR024788 | - | |
| Gso7g1084 | 901 | Pfam | Leucine rich repeat | 419 | 475 | IPR001611 | GO:0005515 | |
| Gso7g1084 | 901 | Gene3D | Ribonuclease Inhibitor | 364 | 489 | IPR032675 | - | |
| Gso7g1084 | 901 | SMART | serkin_6 | 573 | 858 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Gso7g1084 | 901 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 695 | 707 | IPR008271 | GO:0004672|GO:0006468 | |
| Gso7g1084 | 901 | SUPERFAMILY | Protein kinase-like (PK-like) | 558 | 854 | IPR011009 | - | |
| Gso7g1084 | 901 | ProSiteProfiles | Protein kinase domain profile. | 573 | 858 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso7g1084 | Gso-Chr7 | 15248662 | 15254723 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso7g1084 | 8 | 887 | Receptor kinase-like Gene Family | AT4G29180 | 51.111 | 0.0 | 873 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_LRR-I-1 | Gso7g1084 | Malectin_like | 9.2e-106 | CL0202 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso7g1084 | - | - | gmx:100793137 | 1637.47 |