Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1066 ATGTCAAACTTGCATTGCATGTTCATCTTGTTAGCAGTTCTTGTTCTTCTTCTGCAAAATTCCAGCAGAATACATTGCCATACCAAGGGAATTAGACCAAGACGTTCTGCAGGTAAAGTGTTATCGACCAACATGACTAGAGTGCATTATTCTGAACAGCAATTCATGAAATGGGTGAATTTTGTTGGTTCCCTCAAACACTCAGTTTTTAAGTCAGCTAAAAATAAGCTTGTGGCTTCTTACACTTTGCACGTTGATAAGAATCCTAATGCTGGAGATTTTACCTCAATTCAAGAAGCCATTGATTCCCTTCCATTCATCAATCTTGTGAGAGTGGTCATTAAAGTCCATGCAGGGGTCTACACGGAGAAAGTTAACATTCCTCCTTTGAAATCCTACATAACAATAGAAGGAGCTGGTGCAGATAAAACCATTGTTAAATGGGGTGACACTGCTCAAACACCTGGCTCAAATGGGAGGCCACTAGGAACCTATGGTTCAGCAACTTTTGCTGTGAATTCACCTTATTTCCTTGCCAAGAACATCACATTCCAAAACACAACTCCTGTTCCTGCACCAGGAGCAGTTGGAAAGCAAGCGGTTGCATTAAGGATTTCAGCAGACACAGCAGCATTTGTAGGCTGCAAATTCTTAGGAGCACAAGACACACTTTATGATCATTTGGGCAGACATTTCTATAAGGATTGTTACATCGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTCTCACTGTTTGAGGGATGTCACGTGCATGCCATAGCACAGAATACAGGGGCCGTAACAGCTCAAGGAAGGAGTAGTATGTTAGAGGACACGGGGTTCTCATTTGTGAACTGCAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCTTGGGGACCCTTTTCTCGCGTGGTCTTTGCCTACACATATATGGAAAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGATCCTAACCGTGAAATGACTGTATTCTACGGGCAGTACAAATGCACAGGACTTGGAGCAAGCTTTGCAGGGAGAGTACCATGGTCGAGAGAGCTTACTGACGAGGAAGCTACACCTTTTCTTTCACTTAGCTTTGTTGATGGAACCGAATGGATCAAAGTGTAG 1146 0.4346 MSNLHCMFILLAVLVLLLQNSSRIHCHTKGIRPRRSAGKVLSTNMTRVHYSEQQFMKWVNFVGSLKHSVFKSAKNKLVASYTLHVDKNPNAGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPPLKSYITIEGAGADKTIVKWGDTAQTPGSNGRPLGTYGSATFAVNSPYFLAKNITFQNTTPVPAPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHLGRHFYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMENIIIPKGWYNWGDPNREMTVFYGQYKCTGLGASFAGRVPWSRELTDEEATPFLSLSFVDGTEWIKV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1066 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Gso7g1066 381 Pfam Pectinesterase 90 375 IPR000070 GO:0030599|GO:0042545
Gso7g1066 381 PANTHER PECTINESTERASE 7 380 - -
Gso7g1066 381 Gene3D - 78 381 IPR012334 -
Gso7g1066 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 380 - -
Gso7g1066 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1066 Gso-Chr7 14941327 14945890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1066 83 380 Carbohydrate Esterase AT1G05310 47.712 3.66e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1066 K01051 - gmx:100817924 775.778