Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1065 ATGTCTCTCATTCACATTGACACTGTTTGCTTTTCTTTTTATTTCATTTCTTATTATTTTGGAGGGTCTCAAACAATTGCATACTTTAACGCCCCACGTTTCACCATATTTTTAGGTTGTTGCTCTAATTCTTGCAGTGAGGCTATGGGGAGAGCCACTAGGTGGGTGAAGAGTTTGTTTGGAATAAGAAAAGAGAAAGAGAAGAAACAAAACTTCAAGTGTGGAGAGGCTAAAAGCATGGAATTCTGTTGTTCTGAGAGTACTAGTAATTCAAGAGTTTTGTGTCACAATCCAGGGACTATAACCCCCAACCTTTCTCAAGCTGAGGCTGCTTGGTTACAATCCTTCTACACAGAGAAGGACCAAAACAAGCACGCCATCGCCGTTGCTGCTGCCACGGCAGCAGCAGCTGATGCTGCCATGGCAGCAGCACAGGCTGCAGTGGCGGTTGTTAGGCTCACCAGCCAAGGAAGGGGTGGCACCATGTTTGGGGTTGGACCTGAGATGTGGGCTGCCATCAAGATTCAAACAGTGTTTAGAGGATACCTGGCAAGGAAGGCACTGAGGGCATTAAAAGGATTGGTGAAGTTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACCTTGCATAGTATGCAGGCTCTTGTTAGAGCTCAAGCTACTATTCGGTCCCACAAATCTCGCAGGCTCATGACCACAAAGAATGAAGCATATAGATCTCAAATTAGAGCAAGAAGATCCATGGAGAGGTTTGATGACACTAAGAGTGAGTATGCAGTTCCAATCCACAGTAGAAGGGTATCATCTTATTTTGATGCTACAATTAACAACAACAGTGTTGATGGGATCCCCAAAATAGTGGAAGTGGACACTTTCACGCCTAAGTCAAGGAATAGAAGGACAGTATCAGATTTTGGTGATGAACCATCACTTCAAGCACTTTCAAACAGAACCCCTACGCGTTTGTCCATACCAGACCAAAGGAATTTTCAGGACTCTGAATGGGGGTTAACAGGAGAAGAGTGCAGATTCTCCTCTACAGCACAAAGCACTCCACGCTTCACAAATTCTTGTAGCTGTGGCTCAGTTGCAGTACCTATGACACCAAAGAGTGTGTGCACTGATAACTTGTTCTTCCTAAGGCAGTATGGGAATTTTCCAAACTACATGGCTAGTACTCAGTCTTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGGCCAGAGCCTGGTCCAAGGAAGAGGATTTCCCTCAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGGGTTAGAATGCAGAGGTCTTGTTCACAGGTTCAAGAAGTCATTAGTTTCAAGAATGCTGTGATGGGGAAGCTTCAGAAATCCACATAA 1398 0.4471 MSLIHIDTVCFSFYFISYYFGGSQTIAYFNAPRFTIFLGCCSNSCSEAMGRATRWVKSLFGIRKEKEKKQNFKCGEAKSMEFCCSESTSNSRVLCHNPGTITPNLSQAEAAWLQSFYTEKDQNKHAIAVAAATAAAADAAMAAAQAAVAVVRLTSQGRGGTMFGVGPEMWAAIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALVRAQATIRSHKSRRLMTTKNEAYRSQIRARRSMERFDDTKSEYAVPIHSRRVSSYFDATINNNSVDGIPKIVEVDTFTPKSRNRRTVSDFGDEPSLQALSNRTPTRLSIPDQRNFQDSEWGLTGEECRFSSTAQSTPRFTNSCSCGSVAVPMTPKSVCTDNLFFLRQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPGPRKRISLNEMMESRSSLSGVRMQRSCSQVQEVISFKNAVMGKLQKST* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1065 465 SMART iq_5 190 211 IPR000048 GO:0005515
Gso7g1065 465 SMART iq_5 167 189 IPR000048 GO:0005515
Gso7g1065 465 Pfam Protein of unknown function (DUF4005) 356 436 IPR025064 -
Gso7g1065 465 Gene3D - 165 193 - -
Gso7g1065 465 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 49 465 - -
Gso7g1065 465 ProSiteProfiles IQ motif profile. 192 219 IPR000048 GO:0005515
Gso7g1065 465 ProSiteProfiles IQ motif profile. 168 196 IPR000048 GO:0005515
Gso7g1065 465 Pfam IQ calmodulin-binding motif 170 189 IPR000048 GO:0005515
Gso7g1065 465 Pfam IQ calmodulin-binding motif 195 209 IPR000048 GO:0005515
Gso7g1065 465 ProSiteProfiles IQ motif profile. 216 245 IPR000048 GO:0005515
Gso7g1065 465 PANTHER IQ-DOMAIN 5-RELATED 49 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1065 Gso-Chr7 14931812 14934032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1065 49 440 IQD Protein Family AT3G16490 50.868 1.15e-92 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1065 - - gmx:100788710 874.774