Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1039 ATGCCTTTGGAGGACTTCTACAAGATATTTGGTGCCACCAAGTTCAAAAGTCTGTTTTGGACTTCATGGCAGCCCTTAGAATCAACATGCTTGTTGGAGCATATTATTTTACCTGTGGAACTTGGTTTCTTAGTGATCTTGTTATTCCAACTCCTAAGAAAATATGTGAGCCAGTTCAGCAAGCAAACCAAGGTCCCAGATGGTGCCACAAAAATGATGCATCCAACTGCAATCAAATTTGGTTTTGCATACAAACTCACCTTTGTTTGCACCACATTGTTGTTGGTTGTTCATTCATCACAGCTATTGCTGATGCTCAATAATGAGACTCAATGCACCTCAAAACTTCAGGCCTTCACATCAGAGATAGTTCAAGTGCTATCATGGTCAATTAGTCTTATAGCAATATGGAAGATATCAAAATCACACACATATTTCCCTTGGATTCTGAGGGCTTGGTGGCTTTGCAGTTTCATTTTGTGTATCATAACCACAGCCCTTCATGCCCATTTCAGTGTCATCAACAATGGTCAGATTGGTTTAAGAGAATGTGCAGATTTCCTTGGTTTGCTTGCTTCGACATGCCTTTTGGTTATTTCCACAAGAGGGAAGACAGGCACTGTCCTTCTTGCCACAAATGGTGCATCTGAACCACTTCTTGGAGAGAAAGCTGAGAGGCATTCAGAGTGTCTAAAGGAATCTCCATATGGAAAAGCCACACTTCTCCAACTAATAAATTTCTCTTGGCTCAACCCCTTGTTTGCAGTAGGGTATAAGAAACCCCTTGAGCAGAATGACATTCCTGATGTTGACATCAATGACTCTGCTGAGTTTCTAACATGCTCCTTTGATGAGAGCCTTAGGCAAGTCAAAGAGAAAGATGGCACTGCTAATCCATCTATCTACAAGTCAATCTACTTGTTTGCTAGGAAGAAAGCGGCAATCAATGCATTGTTTGCAGTGGTAAATGCTTCAGCATCATATGTTGGTCCATACTTGATAACTGACTTTGTGGATTTCCTAGGAGAAAAGGGATCGCGCGGCTTGAAGAGCGGATACCTTCTGTCACTGGCTTTTCTGTGTGCCAAAATGGTTGAGACCATAGCTCAGAGGCAATGGATTTTCGGTGCCAGACAATTAGGCCTTCGCCTTAGAGCGGCATTGATATCGCATATATATCAGAAGGGCTTACATCTTTCAAGTAGATCGCGGCAAAGTCACACGGGCGGTGAGATAATGAATTACATGAGTGTAGATGTGCAGAGAATCACAGATTTTGTTTGGTATGTGAATGTGATATGGATGCTGCCTATTCAAATTTCTTTGGCAGTGTTCATTTTGCATACAAATCTAGGACTAGGTTCATTGGCTGCATTAGCTGCTACATTGGCAGTGATGACTTTGAACATTCCTCTTACAAAGATACAGAAAAGATACCAAGCCAAGATCATGGACGCCAAGGACAACAGGATGAAAGCCACTTCAGAAATCCTCAGAAACATGAGGACTTTGAAACTTCAAGCATGGGACAGACAATTTTCTCAAAGGATAGAAGCACTTAGGCAGATAGAGTACAATTGGTTAATGAAGTCATTGAGGCAAGCAGCATTTTCTGCTTTCATCTTTTGGGGGTCACCTACATTCATTTCTGTGATAACTTTTTGGGCATGCATGTTCATGGGGATTGAACTGACAGCAGGAAGGGTCTTGTCTGCATTTGCCACGTTCCGAATGTTGCAGGATCCTATATTTAGCCTGCCTGACTTGCTCAATGCCATTGCTCAAGGAAAAGTTTCAGTCGATAGGATCGCTTCCTTCCTCCGCGAGGAAGAAATCCAGCATGATGTCATTGAAAATGTTGCAAAGGACAAAACAGAATTTGACATAGTTATTGAGAAAGGGAGATTCAGCTGGGATCCTGAATCAAAAACTCCAACCATTGATGAAATAGAGTTGAAAGTTAAGAGGGGAATGAAGGTAGCAGTTTGTGGATCTGTAGGTTCAGGAAAGTCTAGTTTGCTATCAGGCCTTTTGGGAGAAATATATAAACAATCTGGGACTGTGAAGATCAGTGGAACAAAGGCTTACGTGCCACAATCAGCATGGATACTGACTGGAAACATAAAGGACAACATTACCTTTGGAAAAGAGTACAATGGTGATAAGTATGAGAAGACTATTGAGGCATGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGACATGACAGAGATTGGAGAGAGAGGGATTAACATGAGTGGGGGACAGAAGCAAAGGATACAGATTGCTAGAGCAGTTTACCAGGATGCTGACATTTACCTTTTTGATGACCCTTTCAGTGCTGTTGATGCTCACACTGGCACCCACCTCTTTAAGGAGTGCCTTATGGGGATTCTCAAAGAGAAAACTATAATTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATAGCACAAGCTGGAAAATTTGAAGATCTTCTAAAGCAAAATATAGGATTTGAAGTTTTAGTTGGTGCTCACAGCAAAGCTCTAGAGTCAATTATTGTGGCTGAAAATTCAAGTAGAACAAATTTAAATTCAATAGCTGAAGAAGGGGAATCTAACTTCAGCTCCAAGCCAAGTCATCAACATGTGCAAACACAGCATGACTCAGTGCAAGACAATCCTCCAGAGGGCAAAGGAAATGATGGAAAGTTGGTGCAAGAAGAGGAAAGAGAAACAGGAAGCATAGCAAAAGAAGTTTACTGGGAATATTTGACCACTGTCAAAGGGGGAATTCTGGTTCCTCTCATTCTCTTGGCACAGTCTTCATTCCAAATACTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCCACAAGTAGTGATGCTAAGCCTATATTTGACATGAATTTCATACTACTTATTTATATGGCACTCTCAGTTGCTGGTTCATTTTGTGTTTTGCTGCGAGCCATGATGGTGTTAAATGCTGGACTTTGGACAGCACAGACACTTTTCACAAAGATGTTGCATAGTGTGCTCCGTGCCCCCATGGCATTTTTTGATTCTACACCAACTGGAAGAATATTGAACAGGGCTTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAAACAGAATAGGATGGTGTGCTTTCTCAATAATACAGATTCTAGGCACTATTGCAGTGATGTGTCAGGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACTGCAGTCTGCATATGGTACCAACGATATTATACGCCAACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATCACTCCAATTCTCCACCATTTTTCAGAATCATTAGCAGGAGCAGCATCAATACGAGCTTTCGATCAGGAAGGCCGTTTCATATACACAAATCTTCTCCTTGTGGATGGCTTCTCAAGGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTGAATTTACTTTCAAATTTTGTTTTTGCCTTCTCACTAGTCATGCTAGTGAGCCTCCCTGAAGGAATAATCAATCCAAGTATTGCTGGGTTGGCAGTAACATATGGGATCAATCTGAATGTGTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAACAAGATGATATCAGTTGAAAGGATCCTTCAATATACAAATATAACAAGTGAAGCACCTCTTGTGATTGAAGACAGCAGACCACCTAGCAACTGGCCAGAAACTGGAACAATATGTTTCAAAAATTTGCAGATACGTTATGCTGAACATCTGCCATCTGTGTTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAGTTGGTGTTGTAGGGCGTACCGGGAGTGGAAAATCAACTCTCATACAGGCCATTTTCAGGATTGTTGAACCAAGAGAAGGAAGCATTATAATTGACAATGTGGACATATGCAAGATAGGTCTCCATGACTTAAGGTCAAGGCTTAGCATTATTCCACAAGACCCTGCCTTGTTTGAAGGCACTGTTAGAGGAAACCTGGACCCATTGCAGCAATACTCTGACATTGAAGTGTGGGAGGCTCTAGATAAATGTCAGCTAGGTCACCTAGTAAGGGCCAAGGAAGAGAAGTTGGAATTCCCAGTGGTTGAAAATGGTGATAACTGGAGTGTGGGCCAAAGGCAATTATTTTGCCTTGGAAGAGCCCTGCTGAAGAGAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTGGATTCTGCAACTGATGGGGTGATACAGAACATCATAAGCCAAGAGTTCAAAGATAGGACTGTTGTCACAATAGCTCATAGAATCCACACAGTTATTGATAGCGATTTGGTTTTGGTGCTCAGTGATGGAAGAGTTGCTGAGTATGATGAACCATCAAAGTTACTAGAGAAAGAAGATTCCTTCTTCTTTAAACTTATAAAGGAGTATTCTGGAAGATCACATAACTTCAGCAACTTGGCAACTCAACATGTCCAAAGCAGGGAGCAATTATAG 4554 0.4152 MPLEDFYKIFGATKFKSLFWTSWQPLESTCLLEHIILPVELGFLVILLFQLLRKYVSQFSKQTKVPDGATKMMHPTAIKFGFAYKLTFVCTTLLLVVHSSQLLLMLNNETQCTSKLQAFTSEIVQVLSWSISLIAIWKISKSHTYFPWILRAWWLCSFILCIITTALHAHFSVINNGQIGLRECADFLGLLASTCLLVISTRGKTGTVLLATNGASEPLLGEKAERHSECLKESPYGKATLLQLINFSWLNPLFAVGYKKPLEQNDIPDVDINDSAEFLTCSFDESLRQVKEKDGTANPSIYKSIYLFARKKAAINALFAVVNASASYVGPYLITDFVDFLGEKGSRGLKSGYLLSLAFLCAKMVETIAQRQWIFGARQLGLRLRAALISHIYQKGLHLSSRSRQSHTGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILHTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQAKIMDAKDNRMKATSEILRNMRTLKLQAWDRQFSQRIEALRQIEYNWLMKSLRQAAFSAFIFWGSPTFISVITFWACMFMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNAIAQGKVSVDRIASFLREEEIQHDVIENVAKDKTEFDIVIEKGRFSWDPESKTPTIDEIELKVKRGMKVAVCGSVGSGKSSLLSGLLGEIYKQSGTVKISGTKAYVPQSAWILTGNIKDNITFGKEYNGDKYEKTIEACALKKDFELFSCGDMTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLMGILKEKTIIFVTHQVEFLPAADLILVMQNGRIAQAGKFEDLLKQNIGFEVLVGAHSKALESIIVAENSSRTNLNSIAEEGESNFSSKPSHQHVQTQHDSVQDNPPEGKGNDGKLVQEEERETGSIAKEVYWEYLTTVKGGILVPLILLAQSSFQILQIASNYWMAWVCPTSSDAKPIFDMNFILLIYMALSVAGSFCVLLRAMMVLNAGLWTAQTLFTKMLHSVLRAPMAFFDSTPTGRILNRASTDQSVLDLEMANRIGWCAFSIIQILGTIAVMCQVAWQVFVIFIPVTAVCIWYQRYYTPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFIYTNLLLVDGFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVMLVSLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNITSEAPLVIEDSRPPSNWPETGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPREGSIIIDNVDICKIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLQQYSDIEVWEALDKCQLGHLVRAKEEKLEFPVVENGDNWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQNIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRVAEYDEPSKLLEKEDSFFFKLIKEYSGRSHNFSNLATQHVQSREQL* 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1039 1517 Gene3D ABC transporter type 1, transmembrane domain 285 613 IPR036640 GO:0005524|GO:0016021
Gso7g1039 1517 Gene3D ABC transporter type 1, transmembrane domain 906 1241 IPR036640 GO:0005524|GO:0016021
Gso7g1039 1517 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 119 1503 - -
Gso7g1039 1517 CDD ABC_6TM_ABCC_D2 941 1235 IPR044726 GO:0140359
Gso7g1039 1517 CDD ABC_6TM_ABCC_D1 315 603 IPR044746 GO:0140359
Gso7g1039 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 852 IPR003439 GO:0005524
Gso7g1039 1517 SMART AAA_5 656 829 IPR003593 -
Gso7g1039 1517 SMART AAA_5 1286 1478 IPR003593 -
Gso7g1039 1517 Coils Coil 476 496 - -
Gso7g1039 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g1039 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 845 IPR027417 -
Gso7g1039 1517 CDD ABCC_MRP_domain2 1258 1478 - -
Gso7g1039 1517 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524
Gso7g1039 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1489 IPR027417 -
Gso7g1039 1517 PANTHER - 119 1503 - -
Gso7g1039 1517 Gene3D - 1243 1496 IPR027417 -
Gso7g1039 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1223 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g1039 1517 Pfam ABC transporter 648 781 IPR003439 GO:0005524
Gso7g1039 1517 Pfam ABC transporter 1277 1425 IPR003439 GO:0005524
Gso7g1039 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1494 IPR003439 GO:0005524
Gso7g1039 1517 SUPERFAMILY ABC transporter transmembrane region 929 1242 IPR036640 GO:0005524|GO:0016021
Gso7g1039 1517 MobiDBLite consensus disorder prediction 876 918 - -
Gso7g1039 1517 MobiDBLite consensus disorder prediction 876 901 - -
Gso7g1039 1517 CDD ABCC_MRP_domain1 629 829 - -
Gso7g1039 1517 Pfam ABC transporter transmembrane region 315 578 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g1039 1517 Pfam ABC transporter transmembrane region 953 1187 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g1039 1517 SUPERFAMILY ABC transporter transmembrane region 309 611 IPR036640 GO:0005524|GO:0016021
Gso7g1039 1517 Gene3D - 627 858 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1039 Gso-Chr7 14297337 14311300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1039 608 843 Calmodulin-binding Proteins AT2G36910 30.709 4.41e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1039 - - gmx:100809749 2919.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1039 7 14297337 14311300 Gso7g1039 7 14297337 14311300 ECH
Gso7g1039 7 14297337 14311300 Gso3g0861 3 30856362 30869204 GST