Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1010 ATGACCAAGAGAACCAAGAAGGCCGGTATTGTTGGAAAATACGGCACCCGATATGGTGCTAGTTTAAGGAAACAAATCAAGAAGATGGAAGTTAGTCAGCACAGTAAATTCTTCTGCGAGTTCTGTGGAAAGTATGCTGTTAAGAGGAAGGCTGTGGGTATTTGGGGCTGCAAAGATTGTGGAAAAGTGAAGGCTGGAGGTGCTTACACATTGAAGTATACATCCAAAACTGATGAGCTTCATCAGCTTTCAACCTCATCATATGGATGA 270 0.4259 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLKYTSKTDELHQLSTSSYG* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1010 89 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
Gso7g1010 89 Pfam Ribosomal L37ae protein family 4 76 IPR002674 GO:0003735|GO:0005840|GO:0006412
Gso7g1010 89 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Gso7g1010 89 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 1 75 - -
Gso7g1010 89 SUPERFAMILY Zn-binding ribosomal proteins 10 75 IPR011332 GO:0006412
Gso7g1010 89 PANTHER ZGC:171772 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1010 Gso-Chr7 13496406 13498970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1010 1 75 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 88.000 1.15e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1010 K02921 - gmx:100796438 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1010 7 13496406 13498970 Gso7g1010 7 13496406 13498970 ECH