Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1004 ATGTCCTTCAATCAATCGAAGTCGGAGAATAACGATGCGGTTTATGGAAAACCCGGGCGATCCTCCAGCTTCAATCAGCAGAGGGGCTCCTACGGCAGGGGTGGCGGGACCGCGCCGACGAGCAATTCACTCTCCTCTAGCCGGAGTTTCAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCCCCTGGGCATTCAACAGAGTTCAATAGTGCATCTACTGCCCGAACCATTAACAATGGTACCCATGTACAGCCACAATTACATGGAGCATCAGATGGGCCAGGTACAAAGTCATCTGAATCATCAGCTGCACATACGAGTGCTGGAATTCTTCCAAAAGCTCCAACTTCTCTACAGCCCCCCTTGATTTCTGATCCAGTCCCTCCCTCAAGCCCTGCCAAGGGAGATGCGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGCTCCTGGCTTTGTTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCCCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACTCTTACAAATCTGTGCCTTCGGTGCCAATTCCTCTTGTTCCAAAGCAGCAACAACCACCTAGGAAGGATGCTGGTGTCACTGAGCAATCTAATGCTGGGGACAGCCGGGAGACTCATAATGGGGGTACTAAGGCAAAAAAGGATCCTCAGGTATCAGCTTTGACACCGGCAAGCCATATGCCAAAGCCCTCTGTTCCTGTAACTGGGATTCCAATGCCAACTCCATATCACCAGTCACAGGCTCCTTTACAGTTTGGCAGTGCTAATCCACAGATTCAATCTCACGGTATGTCAACAGCATCCCTCCAGATGCCTATACCAATGCCTTTACCAATTGGCAATGCTACACAGGTGCAACGACCAGTTTTTGTTCCAGGTCTTCAACCACATCCAATGCATCCTCGGGGAATCATGCATCAAGGCCAAAACATGAGTTTTGCTCCTCAAATGGGTCATCAGTTGCCCCATCAATTAGGCAGCATGGGCATTGGCATCGGTCCTCAATATCCCCAGCAGCAAGGTGGAAAATTTGCTGCTCCTCGAAAAACTACTGTAAAGATAACTCATCCTGAGACACATGAAGAGCTGAGGCTTGATAAAAGGACAGATGCATGTTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTCTATCACCTGTTAAATCTTTTCCAGCTTCTCATCCTGTGAACTATTATTCTTCCAGCTCATATAATACCAATTCTCCCTATTATCCATCTAGTTCTATTCCATTAACAAGTAGCCCGATCTCTCCTAATTCTCAGCCACCGATATTTAATTATCCTGTGAACCATGGTCCACAAGGTGCAAATTTCATGAATTCGTCATCACTTGGTTCCCCACCTATTAGTAAAGCTAGCACTCCAACAGGGGTTGCATCTCTGGCCATTAAGCCAAGTGGTACGTCTGCTAATGTGGACTCATCATTGTCCAATTCCAGTATTTCTGATGTTCAAAATACAGAATCCCCTAGTTCAACAGCATCTTGTGATGCTAGCTCCTCTGTGCTGCAAAAAGGGTCTGAAACTTGTTCAGAAATCTCCTTACCACAGTACAAGTTGTCTAGTGATTCTGTCCCAGTTGTGGATAATAATGAAGGCGGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAAGAAACCAGGGAAGAAAGGTCAATTATCACACCATCAGGTTTCTGTACAATCTCCCACAGCGGATAATGTGCCTTTTTGTGCTGTTGACCATGGAATATATGATACCGGAGTTTCCAAACCTGTAGGAACTAAAACAAACCATTCTGCAGAACTTACCACTGAAGATCTTCCAACATCTAATACAATACCTAGTAGCACTTCTACTGCTGTTGAAGTGAAAACCAATGGGTCTGCAGAAGTTGTTGCTTGTGTTTCAGCTGAAGGATCTTGTGCACAAACTGTTGACAGAGTGCACAATAATAATCCTGATAAGATAGATAAATTATTTGAAGGAAAATTTGGCATATCAGATCTGCAGTCTGCTGATCTTCCAGAAACAACATCAAAGCATGTCAAGGATGGGTCAGAGAATACTGGCGATGAGTCAAGTACCAAGGATAGACCAATTATAGAACCAAATAAAGCGAAAACTACATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACGTCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAAGCTGTCTTAAGTTCTGAGAGCACAGAAAGTGCTACCACCACCACTTTGAAGCAGTTGCCAAAAGATGCTGCTCAGTCAGATGCTTTAGCAAGTGAAAAATGTAGTCACAGTAAAGCTGAACTCGATGACTGGGAGGATGCTGCTGACATGTCTACCCCCAAACTGGAGGTTCATGATAAATCTCAACAAGTTGGTGATGGAAGTGGAAGTACAGCCAAAAAGTATTCACGTGATTTCCTTCTGAAATTTGCAGATCAGTGCACTGATCTTCCTGAAGGTTTTAAAGTCACCGCAGACATTGAAGCTTTGATGAGTGGCAATATTGGTAGTTCTCATGTTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAATTGTAGATAGACCCGGTGGGATGTCTCGGATGGATCGCCGTGGGGATGTGGTAATGGAGGATGACAGATGGAGTAGAGTTTCTGGTGCTTTTCGTTCTGGACGTGGTTTGGATGGCATTGGAGGTAATGTGGGATTTCGATCTGGCCAAGGAGGGAATTTTGGTGTCTTAAGGAACTCTCGTGCACAGACACCACCACAATATGTTGGAGGGATCCTTTCTGGGCCAATGCAATCGGTGGGAAATCATGGTGGAAGAAATAACCCTGATGGGGAGAGGTGGCAGCGTTCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACCCAAACTCCTTTACAGATGATGCACAAAGCTGAGAATAAGTATGAAGTGGGTAAAGCATCAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAGGCTATCTTGAACAAACTAACTCCGCAGAATTTTGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTACCTTTTGTGAAATGTATGCCAACTTCTGTTTGCATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGCAGCAAATAAGGCTGACGAGGGTGAGGTTAAGCAGTCTGCTGAGGAAAGGGAAGAAAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACGGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAGTATCAGGATCCATATGAAGAAGACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGATCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAAGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCCGCTCAGGAGAGGCAGGCCCAAGCTGGTAGGTCAGGTCGTGGTCTTGGCAACAATCAATCAGCTAGACGGAATCCCATGGATTTTGGTCCACGAGGATCTTCTATGCTGTCTTCTCCCAATTCTCAAATGGGTGGACTGCGTGGTCTTCCTACTCAAGTTCGTGGGTATGGTGCTTTTCAGGATGCTCGATTTGAGGAACGACAATCTTATGAGGCTAGGACCTTGGCAGTTCCATTGCCTCAAAGACCCTCAGGAGATGATTCTATAAACTTGGGGCCCCAAGGTGGTCTTGCTAGGGGAATGTCTACGAGAGGATCAACAGCAATTTCCAATTTACCAATATCTGATGTGCTTCCTGTCCATGGAGACTCTCATAGAATGAATACAGGTCTTAATGGTCACAGCAATTTATCAGAGCGCACACCATATAGCTCAAGGGAGGATCATGTTTCAAGATATGGTACTGATAGGTCTTCAGGGCCATCTGCTTATGATCAATCAAGTGCTCCAGAGCATAATGTAAACCATGGCAACAGAGGCTTGAGGAGTGAAGATCGGAATCTTGAACCTCTTGCTCATTTGCAAGGGTCAATAGTCTCTCAGAATGCTTCTTCAGAGAAGATTTGGCCAGAAGAACGACTGAGGGACATGTCCTTGTCAGCAATAAGGGAATACTACAGTGCTAGAGATGAGAACGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCGAGCTTCCATCCTTCCATGGTTTCTCTATGGGTCACGGATTCATTTGAGAGAAAGGACGCAGAAAGAGATCTTTTGGCCAAACTACTTGTCAACCTTGTGAAATCTCAGCATGGCACTTTGAATCAAGACCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCGATAGCCATAACAGAGAGTGTAGTTACTTTGAAGGACATTGGGCAGTTAATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTGGGAAGCACGTTGGAGGTAATTCAAAGCGAGAAGGGGGATGCGGTTCTAAACAAGATCTGTTCAGGCTCTAACTTGAGGTTGGAAACTTTCCGGCCACCTAATGCTAAAACATCAAGGAAGTTGGAAAAATTTATTTAG 5025 0.4436 MSFNQSKSENNDAVYGKPGRSSSFNQQRGSYGRGGGTAPTSNSLSSSRSFNKKSNNAQGGQSRVNPPGHSTEFNSASTARTINNGTHVQPQLHGASDGPGTKSSESSAAHTSAGILPKAPTSLQPPLISDPVPPSSPAKGDASKAFPFQFGSIAPGFVNGMAIPARTSSAPPNIDEQKRDQALHDSYKSVPSVPIPLVPKQQQPPRKDAGVTEQSNAGDSRETHNGGTKAKKDPQVSALTPASHMPKPSVPVTGIPMPTPYHQSQAPLQFGSANPQIQSHGMSTASLQMPIPMPLPIGNATQVQRPVFVPGLQPHPMHPRGIMHQGQNMSFAPQMGHQLPHQLGSMGIGIGPQYPQQQGGKFAAPRKTTVKITHPETHEELRLDKRTDACSDGGSSGARSHPNIPSLSPVKSFPASHPVNYYSSSSYNTNSPYYPSSSIPLTSSPISPNSQPPIFNYPVNHGPQGANFMNSSSLGSPPISKASTPTGVASLAIKPSGTSANVDSSLSNSSISDVQNTESPSSTASCDASSSVLQKGSETCSEISLPQYKLSSDSVPVVDNNEGGRESLSRSNSLKDKKPGKKGQLSHHQVSVQSPTADNVPFCAVDHGIYDTGVSKPVGTKTNHSAELTTEDLPTSNTIPSSTSTAVEVKTNGSAEVVACVSAEGSCAQTVDRVHNNNPDKIDKLFEGKFGISDLQSADLPETTSKHVKDGSENTGDESSTKDRPIIEPNKAKTTSKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLSSESTESATTTTLKQLPKDAAQSDALASEKCSHSKAELDDWEDAADMSTPKLEVHDKSQQVGDGSGSTAKKYSRDFLLKFADQCTDLPEGFKVTADIEALMSGNIGSSHVFERDSHPSPGRIVDRPGGMSRMDRRGDVVMEDDRWSRVSGAFRSGRGLDGIGGNVGFRSGQGGNFGVLRNSRAQTPPQYVGGILSGPMQSVGNHGGRNNPDGERWQRSASFQQRGLIPSPTQTPLQMMHKAENKYEVGKASDVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEAANKADEGEVKQSAEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPYEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRSGRGLGNNQSARRNPMDFGPRGSSMLSSPNSQMGGLRGLPTQVRGYGAFQDARFEERQSYEARTLAVPLPQRPSGDDSINLGPQGGLARGMSTRGSTAISNLPISDVLPVHGDSHRMNTGLNGHSNLSERTPYSSREDHVSRYGTDRSSGPSAYDQSSAPEHNVNHGNRGLRSEDRNLEPLAHLQGSIVSQNASSEKIWPEERLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSMVSLWVTDSFERKDAERDLLAKLLVNLVKSQHGTLNQDQLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAIAITESVVTLKDIGQLIHDGGEEPGSLLEVGLAADVLGSTLEVIQSEKGDAVLNKICSGSNLRLETFRPPNAKTSRKLEKFI* 1675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1004 1674 MobiDBLite consensus disorder prediction 553 568 - -
Gso7g1004 1674 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 471 1664 - -
Gso7g1004 1674 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 110 450 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1123 1147 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1304 1318 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1 111 - -
Gso7g1004 1674 SMART if4_15 1031 1253 IPR003890 GO:0003723|GO:0005515
Gso7g1004 1674 MobiDBLite consensus disorder prediction 466 485 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1396 1456 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1 146 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 207 223 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1254 1318 - -
Gso7g1004 1674 Pfam MIF4G domain 1031 1253 IPR003890 GO:0003723|GO:0005515
Gso7g1004 1674 SMART ma3_7 1487 1601 IPR003891 -
Gso7g1004 1674 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 471 1664 IPR045208 GO:0003743
Gso7g1004 1674 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 110 450 IPR045208 GO:0003743
Gso7g1004 1674 MobiDBLite consensus disorder prediction 158 268 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 496 530 - -
Gso7g1004 1674 ProSiteProfiles MI domain profile. 1486 1610 IPR003891 -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 393 410 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 386 412 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1428 1447 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 703 734 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 883 906 - -
Gso7g1004 1674 Gene3D - 1031 1266 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 775 791 - -
Gso7g1004 1674 Pfam MA3 domain 1492 1599 IPR003891 -
Gso7g1004 1674 Coils Coil 1113 1133 - -
Gso7g1004 1674 SUPERFAMILY ARM repeat 1027 1255 IPR016024 -
Gso7g1004 1674 Gene3D - 1481 1674 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 553 593 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 766 812 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 1254 1277 - -
Gso7g1004 1674 MobiDBLite consensus disorder prediction 696 743 - -
Gso7g1004 1674 SUPERFAMILY ARM repeat 1482 1672 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1004 Gso-Chr7 13399225 13407892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1004 1 1673 Eukaryotic Initiation Factors Gene Family AT3G60240 46.375 0.0 1280