Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1003 ATGCAGCTCACTCATCTGTGCCTTATCATGCCCTCAGATTATGATAAACTAGATCCACTTCATGCAACCCCACAAACAAATATTAAAGGGGCACAGAAAAAAGCTAAGTCCAAAAAACACCCTCAAGGTGCACGTGGAGGCCATGTTGTTGCTACCCTTCATGGCTCTTTGACTAGGTTGTGTGACACAAAGTGGTGGAACCTATGCCAACATGGGGCAAGAATAAAAACCAAGCAGATCAAGAGTTCTTGTGTGTTTCATGACATGGAGGGTGTGCAACTCTCTTCCAAGATTGGAAGGGACAGCAACATTAATCCAAGGATTTTCAGCTATGCTGAGCTCTACATAGGATCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGAAGTGGAGGGTTTGGCAAAGTGTACAAAGCTGTGATGCCAAGTGATGAAACAGTGGTGGCTGTGAAGTGTTGCTTGGCTGGGAAAGGTGGTCAATTCGAGAAGACTTTTGCAGCTGAACTTGCAGCAGTGGCACACCTTCGCCACAAGAACCTTGTTCCCTTGAGGGGTTGGTGTGTTTTTGAGGATCAACTTTACCTTGTGTATGACTACATGCCTAATTCGAGCCTCGACCGGGTTCTGTTTCGCAAGAACTTGAAGGAGGAGCCACTTGGGTGGGTGAGGCGTGGGAAAATTGTGAAGGGTTTGGCATCTGCATTGCACTATTTGCACGAGCAGTTGGAGACTCAAATCATTCATAGGGATGTGAAGACCAGCAATGTGATGCTTGATTCCCACTACAATGCTAGGTTGGGGGACTTTGGCTTGGCAAGATGGCTTGAGCATGAGCTTGAGTATGAATATGAGACAAGGAAAGCATCAACATCAAGCAAGTTTGAGCATTTCAGGCTGAGTGAGACCACAAGGATTGGTGGCACAATTGGGTACTTACCTCCTGAGAGCTTCCAGAGAAGGAAAATTGCTACCTCAAAATCTGATGTGTTCAGCTTTGGGATAGTTGTGTTGGAGGTGGTGTCTGGGAGAAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAAGAAGGCTTGTTGCTGCTGTGGACACAAGGCTGAAAGATGGTTCCTACAAGGTTTTTGAGATGGAGAATTTGATTCACATAAGCCTCTTGTGCACACTCCATGACCCTCAATTGAGGCCAAGCATGAAGTGGATTGCGGAAGCACTTTCTGACATGTCAAACAAGTTGCCAACACTCCCTTCATTTCACTCTCATCCTATGTACATCTCTTTGTCCTCCTCTTCTGAGACTAGTCCAAACAGCACAAAAGGCACTGGCACAAGCTCAGGAACAGAAAGTTCTAGCAATCATACTAGTTCCAATTCCAAGTATGTCACAGCCATAGGAGAGACTATATATGTGACTGCTGAAGCTGAAAACAGAAACAGTGGAACTAGCTCTACTAAGAGTAGCAAGAGAGTGATGCATCAGCAGCCATCATTTGTTGAAACACCTAGGGTGATACCATACAAGGAGATTGTTTCAGCCACAGATAACTTCTCAGAGTCCAAAAGGGTGGCTGAGCTAGACTTTGGAACTGCATACCATGGCATCCTTGATGGCCACTACCATGTCATGGTGAAACGCCTTGGCTTGAAGACTTGCCCTGCATTGCGCCAAAGATTTTCCAATGAGCTAAGGAACTTGGCAAAGCTTCGCCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTAGTGGTGTATGATTACTCAGCTAGAAGATTTCTCAGTCACCAACTTCACCATCATAAGAATGGTACTAAAAATAGCAATTCTGTCCTCAAATGGCATCATAGGTATAACATAGTGAAATCACTTGCATCTGCACTTCTCTATCTGCATGAGGAATGGGATGAACAAGTCATTCACAGGAACATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGACCCCAAGACTAGGTAGTTTTGCTCTGGCTGAGTTTTTGTCAAGGAATGAGCATGGCCATCATGTAATCAGCAATAGGAGCAAGTCGGTTTGTGGGATTTTCGGCTACATGTCACCAGAATATGTGGAATCCGGTGAGGCAACAGCAGCTGCTGATGTTTATAGTTTTGGTGTAGTGGTGCTTGAGATTGTAAGTGGACTTAAGGCTGTGGATTTTAGGCAACCTGAGGTGCTATTGGTAAAGAAGGTTCATGAATTTGAGGTGAGAAAAAGGCCACTTGTGGCATTAGCAGATATAGGACTAAATGGAGAGTACAATTTCAAGGAGTTAATGAGATTGGTAAGCTTAGGAGTTGCATGCACCCGTTCTGACCCAAAATTAAGACCAAGTACTAGACAGATAGTAAGCATTCTTGATGGCAATGACAAATTAATCATGGGAGAGAACATGGAGAGCAGGGAAGATTGGAGAGAAAGAAATGCTTGCTCTTTGTCACTGGTTAAGAGAATTCAAGCTCTAGGAATACAATGA 2538 0.4476 MQLTHLCLIMPSDYDKLDPLHATPQTNIKGAQKKAKSKKHPQGARGGHVVATLHGSLTRLCDTKWWNLCQHGARIKTKQIKSSCVFHDMEGVQLSSKIGRDSNINPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDETVVAVKCCLAGKGGQFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNSSLDRVLFRKNLKEEPLGWVRRGKIVKGLASALHYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELEYEYETRKASTSSKFEHFRLSETTRIGGTIGYLPPESFQRRKIATSKSDVFSFGIVVLEVVSGRRAIDLTYPDEKIILLDWVRRLSDERRLVAAVDTRLKDGSYKVFEMENLIHISLLCTLHDPQLRPSMKWIAEALSDMSNKLPTLPSFHSHPMYISLSSSSETSPNSTKGTGTSSGTESSSNHTSSNSKYVTAIGETIYVTAEAENRNSGTSSTKSSKRVMHQQPSFVETPRVIPYKEIVSATDNFSESKRVAELDFGTAYHGILDGHYHVMVKRLGLKTCPALRQRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSARRFLSHQLHHHKNGTKNSNSVLKWHHRYNIVKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLSRNEHGHHVISNRSKSVCGIFGYMSPEYVESGEATAAADVYSFGVVVLEIVSGLKAVDFRQPEVLLVKKVHEFEVRKRPLVALADIGLNGEYNFKELMRLVSLGVACTRSDPKLRPSTRQIVSILDGNDKLIMGENMESREDWRERNACSLSLVKRIQALGIQ* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1003 845 PANTHER - 1 844 - -
Gso7g1003 845 MobiDBLite consensus disorder prediction 436 467 - -
Gso7g1003 845 Pfam Protein tyrosine and serine/threonine kinase 530 805 IPR001245 GO:0004672|GO:0006468
Gso7g1003 845 Gene3D Transferase(Phosphotransferase) domain 1 608 829 - -
Gso7g1003 845 ProSiteProfiles Protein kinase domain profile. 526 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1003 845 ProSitePatterns Protein kinases ATP-binding region signature. 127 156 IPR017441 GO:0005524
Gso7g1003 845 ProSiteProfiles Protein kinase domain profile. 121 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1003 845 Gene3D Phosphorylase Kinase; domain 1 95 198 - -
Gso7g1003 845 SUPERFAMILY Protein kinase-like (PK-like) 505 808 IPR011009 -
Gso7g1003 845 SUPERFAMILY Protein kinase-like (PK-like) 103 443 IPR011009 -
Gso7g1003 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Gso7g1003 845 Gene3D Phosphorylase Kinase; domain 1 485 602 - -
Gso7g1003 845 Pfam Protein kinase domain 122 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1003 845 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 844 - -
Gso7g1003 845 SMART serkin_6 121 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1003 845 MobiDBLite consensus disorder prediction 482 504 - -
Gso7g1003 845 Gene3D Transferase(Phosphotransferase) domain 1 199 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1003 Gso-Chr7 13386969 13389896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1003 516 813 Receptor kinase-like Gene Family AT3G53810 36.304 1.24e-50 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso7g1003 PK_Tyr_Ser-Thr 5.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1003 - - gmx:100781955 1641.71