Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1001 ATGGAAGAGTCACCGGAAAGGTGGCTTCGTTTTTTGGAAATGGATGAGTGCAATTTATTTGGTCACATGCACTCTCTTGTGGAAGTGTTCAAGGGGGAGAATCTAGTGCAACAAGAAAAATCTTGCAAAAGTCACCCTTGTGATTCAAATATCACTAAAGAAAGCACCACCATCCTTCTTAGGAACCCTATAAATGATTCATCATCTTTGGAAAAGAACCCTGGCTTTGATAACCGTAGTAGTCTCAAACAACATGCATCTCAAGATGAACCTCTCTTCTCATCCTCCTCAATGCCCTACACTCTTTCATTTGAAGATTCAACGGCAGTGCCATATGTTCTCAATAAAACATGCCAATGTTATCATGGTGAAAATTCAAAGGAAACCCAAGAAGAACCAAAAAATAATAGAAAATCTAAGAGGGGTAGAAGCTCTTCTGAGATACAAGATCACATAATGAGTGAGAGAAAGAGGAGAGAGAATATCGCCAAGCTGTTCATAGCACTTTCAGCTGTTATTCCGGTGTTGAAAAAGAAGCGTGTAAAGGATTTAGAGGAAGAGAGCAAAAAGAGAAAAGTAGAATATGCAGTATGCTTCAAAACGAACAAATACAATATTGGTACTGTTGTTGATGACTCAGATATACCTATCAATATACGTCCCAAAATTGAAGCAAGAGTCTCAGGAAAAGATGCGCTCATCAAAGTTATGTGTGAGAAACGAAAGGACATTGTTGCTAAGATCCTGGGCAAGCTTGCAGCTCTTAATCTCTCAATAGTTTGCTGCAATGTTTTGCCGTTTGCAAATTCCGCTCTGAACATTACTTGCATTGCTCAGATGGATCATGAATTCACCATGACACTGGACGACCTAGTGAAAATTTTGACTGAGGACTTGTTCGACTGCTGTAACTAA 915 0.3934 MEESPERWLRFLEMDECNLFGHMHSLVEVFKGENLVQQEKSCKSHPCDSNITKESTTILLRNPINDSSSLEKNPGFDNRSSLKQHASQDEPLFSSSSMPYTLSFEDSTAVPYVLNKTCQCYHGENSKETQEEPKNNRKSKRGRSSSEIQDHIMSERKRRENIAKLFIALSAVIPVLKKKRVKDLEEESKKRKVEYAVCFKTNKYNIGTVVDDSDIPINIRPKIEARVSGKDALIKVMCEKRKDIVAKILGKLAALNLSIVCCNVLPFANSALNITCIAQMDHEFTMTLDDLVKILTEDLFDCCN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1001 304 Gene3D - 131 210 IPR036638 GO:0046983
Gso7g1001 304 MobiDBLite consensus disorder prediction 62 94 - -
Gso7g1001 304 PANTHER BHLH TRANSCRIPTION FACTOR 5 178 - -
Gso7g1001 304 PANTHER BHLH TRANSCRIPTION FACTOR 179 304 - -
Gso7g1001 304 MobiDBLite consensus disorder prediction 125 149 - -
Gso7g1001 304 MobiDBLite consensus disorder prediction 124 149 - -
Gso7g1001 304 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 178 - -
Gso7g1001 304 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 179 304 - -
Gso7g1001 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 181 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1001 Gso-Chr7 13273601 13277444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1001 7 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 31.940 4.11e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1001 - - gmx:100799087 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1001 7 13273601 13277444 Gso3g0896 3 32272958 32276414 GST