Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0998 ATGCTCCGCCGCGCAACCACCTCCCTCATCTCCGGCGCCTCCCGCCGCCGCCTCTCCACCGACGTGCCGGCGACGCCGGCGGCGGATTCCGTCTTCGCGGAGGCGTGGAAGAAAGTGAGCCCCAACATCGACCCGCCGAAGACGCCGCTGGCGTACATGAAGCCCCGACCACCCACTCCTTCGACTCTCCCCTCCAAACTCACCGTCAACTTCGTCTTGCCCTACGCTTCTCAATTGGCCGCAAAAGAGGTTGATATGGTCATTGTACCAGCAACAACTGGGCAGATGGGTGTTCTCCCAGGACATGTAGCAACAATTGCAGAGTTGAAACCTGGTGTCCTATCTGTACATGAAGGGAACGATGTGACCAAGTACTTTGTCAGCAGTGGCTTTGCATTCATCCATGCAAACTCTGTGGCTGATATAATAGCTGTTGAGGCCGTGCCGGTAGACCGAATTGATGTGAATCTAGTCCAGAAGGGTCTCCAAGAGTTCACTCAGAAACTGAACTCAGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGGGTTGATGTCCATAGCGCTCTCAACTCTGCTCTTTCAGGCTAA 594 0.5488 MLRRATTSLISGASRRRLSTDVPATPAADSVFAEAWKKVSPNIDPPKTPLAYMKPRPPTPSTLPSKLTVNFVLPYASQLAAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDVNLVQKGLQEFTQKLNSATTDLEKAEAQIGVDVHSALNSALSG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0998 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gso7g0998 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gso7g0998 197 Coils Coil 162 182 - -
Gso7g0998 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 6 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gso7g0998 197 Gene3D - 57 153 IPR036771 -
Gso7g0998 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Gso7g0998 197 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 78 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Gso7g0998 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Gso7g0998 197 Gene3D - 154 196 - -
Gso7g0998 197 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 6 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0998 Gso-Chr7 13130805 13134505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0998 16 197 Primary Pumps ATPases AT5G47030 76.374 1.33e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0998 K02134 - gmx:100799603 371.318