Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0990 ATGGAAGGAGAGAGAGGTGTCAGTCCCAATTTTGAGCTCCAAGTTTCATTCACAAACACCCCTCAAGCGATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAACCAGGTTCTTAGTTTCTTGGCACCCTCTGCTCAATCCCAATCTTGTCAGCTCTCTCAATCTCTAAACGCCGGCAGCAGCGGTAGCAATACTGCTGTGGCCGCTACCACCACATTCACCGTCACTGCCACCACCTCCGGATCCGGAGCAACAATTGGTTTCAGCCATAATGACCTTGTCTCCAGAACTTCTTGGAATAATAATGAACAGGTGCGAACACTGGATCCCAAAGCTGTCAATGACGAAAATTGCACCGGAAATACTAGTGATGGTGGCAACAACACATGGTGGAGAAGTGCAGGCTCAGAGAAGAACAAGATGAAAGTGAGGAGGAAGCTGAGAGAGCCACGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTGAAGAATAGCCTTCACCCAAGAAGTTACTACCGCTGTACCCATAACAACTGTAGGGTGAAGAAAAGAGTTGAACGACTATCTGAAGATTGTCGTATGGTAATAACTACCTACGAAGGCAGACACAACCACTCTCCTTGTGATGACTCAAATTCATCGGAACATGAATGTTTCACCTCTTTTTGA 714 0.451 MEGERGVSPNFELQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSCQLSQSLNAGSSGSNTAVAATTTFTVTATTSGSGATIGFSHNDLVSRTSWNNNEQVRTLDPKAVNDENCTGNTSDGGNNTWWRSAGSEKNKMKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0990 237 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 235 - -
Gso7g0990 237 ProSiteProfiles WRKY domain profile. 158 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g0990 237 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g0990 237 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 235 IPR044810 GO:0003700
Gso7g0990 237 SUPERFAMILY WRKY DNA-binding domain 155 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g0990 237 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g0990 237 Gene3D WRKY domain 149 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0990 Gso-Chr7 12780336 12788786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0990 3 237 WRKY Transcription Factor Family AT2G44745 54.545 8.49e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso7g0990 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0990 - - gmx:100800671 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0990 7 12780336 12788786 Gso7g0990 7 12780336 12788786 ECH