Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0986 ATGTCCAGTTCCCGCTCCATTTGCTCTCTCTGTCTCTGTGTCTCTCTAAACCTGGTCTCATCGCAGATTCGCAAACACACACACTTCAGATCCGAATCTCCATCCATGGCGGAGTCCGAATTCGAACCAAACGTTGACCTCGAAGAGAAATCGTGGCACCTCCTCGCGCTCCTCCTCCGAATTGGCCACGCCGTTTACCCGCAACGCCTCGCCGCGCAGTGTCGTTTGTTCGCTGCCTCGCCGAACTTCGTCTGCCACGTCGGCACTCTCCCCGGCTCGCCGATCTCCGTCACCGACAACGGACTGGTCACGCCCTCCGTCGGCACCGTCTTCGCCCTCGGAAGCTTCTTCTCCCTCCACTTCTCGCCGCCGCAGCCACAAACGTACCGTTTCAGGAAACGCAAATCGCTTTTCGATTACGGCGAAGATGGAAGGGAGCACAAGAAGTTGGCGATTCGTGATGGACTTCGAGAATTTTCGTTCCAGAGTTTTGCTGATACCACAGAGACTCTGATGAGAAGAAATTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGCAGGAGTTTTGTATTCCCCTTGCGTATTGATAAAAATGAAGAGTGTTCAGGTTGTCCAATGCCAAATTTTGAACATCGGGAAGCCAATAATGATGCCAGGACAACCATGTCTAATGGAGAGGTTTCTGAATCTATTATCAAAGCACTGACAAAAAAAAAATCAATTATCAAAGCAAGTTACTTGAACTGTCTGAAGCTAGTGGATAGAAATAGATTCATGGACTGTAATCTCTTTGTTGACCGTGCTCTCTTGGATCCCTCATTATGCAAAGACGGAATTGTTAACAGCCTTGGATTTGGGAAGAAAATGGATTCTTTTGGCACATTTATGCATGACTATGCCGAACAAAACAGTATTCGTCATGTGGATGAAGATGGTATTGGTAAAAGTAATACTTGCAAAGATCAACCGAGAGAACCTAATGAAGATGATGAGGTGGAAAGTGGTTCACAGAAAGGGCTGATTGATTCTGTCACAAATAGAGACAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTAGAGAAGAATTGACTAATGGTTTGGAACAAAAGAACCGTGTCCATGCAATGAATTTGGAAAAGGAGAGTGAGAGAAACACAGGCACTAAGTCTACAAATAAAATAGCAAATTCCTCTTCAATACCAAAGCGGCTTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTCCACCCTAAGTCACAAATTCTCAAAGAGTCACTAGCCAGTAATAAATTTGGTAATGTTCCAAAAAATGTTGATCAATGTAGAAATGATCAGAAACTTACAGCGAGGAAGCAAAATCGTAATGAGAACATGGCAGGAATTATTGCCACTACTACTAAGGTGGAGAAAAGAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACCGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAAAGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTATATAATAAGGTACGAGGGCTCTTTAAAAAATGGAAATAGCGATTGCTTTGTTTTAGAACATGTTGACCATGATAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTTCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCGCTTTATTGCTTACACAAAGAGGGAGTTGTTCACAGAGACGTTAAACCTGGAAACTTCCTTTACTCTCGAAAGTTAAGCAAAGGCTATCTTATTGATTTTAACCTTGCCATGGATTTAAAGCAGAAGCACAACGTTGGAAGTAAATCAAAACCAAGCCTTGATGCATCATCCAATGTTATTTCTTTCTCTTCTGGTTCTGCCCCTTTGGTCCGAGACAAGAACCTTGGAGGCAGCAAGTCTTTACCATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGAATGCAAAGGAAAAGGCTTATACTGTTCATCTGAAAAATTGTCCTGATAAGGCTGGTGGGAGTTTTCTTAGAGCACAAGGAACAGATGGCTCTGGTATAACTTCTGCCAAAGATGCTAGCACTAGGACTGCTTCTGCAGAAAGGCTCAGGGAACCTTTACCTTCCCATGGAAGAAAGGAGCTTATCAGCCTTGTGAATACTATGAAATGTGCAAACAGTTCAACAATAGGTCCTTCTTCTCAAAGGAAAAGGGTTACTGCTCCCTCAAGCAAGGCAGATGACAACATTTTTTATATTACCCCGATGCCTTTGCATTCATCTACTGTTGGTGGGGGATTATTGAGAAGCAAAGGTGATGGAAAGAAAAAAGAAGGTTCATGTGTTGGAACCAAAGGATTTCGTGCTCCGGAGGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACTTGGTGATCGGGAAGACTCCTTTCACTGGCGACCCAGAACAGAATATAAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCTAAGCTACATGACCGTGAATTATCTTTTCCTGTGGAGTTACTTAATGACCGATACTTACAGTCATGGGATTTAGAAGGCTGGTGCAAGGTTCACACAAAGAGACCTGAGTTTCTTGAGCAGATCCCCAAATCGTTATTTGATTTGATAGACAAGTGTCTAACAGTTAACCCAAGAAATAGGCTCAGTGCTGAAGATGTTCTAAGACATGAATTCTTTGACTCAGTTAATGAGTCCCTGAGGAAGAAAAGGATGATTCATCGTCATCGAGCTCTTGGGTCGGATGACACTGCAGCTTCCAGAGCAATCTGA 2952 0.4251 MSSSRSICSLCLCVSLNLVSSQIRKHTHFRSESPSMAESEFEPNVDLEEKSWHLLALLLRIGHAVYPQRLAAQCRLFAASPNFVCHVGTLPGSPISVTDNGLVTPSVGTVFALGSFFSLHFSPPQPQTYRFRKRKSLFDYGEDGREHKKLAIRDGLREFSFQSFADTTETLMRRNFPVIKFESQNIGSRSFVFPLRIDKNEECSGCPMPNFEHREANNDARTTMSNGEVSESIIKALTKKKSIIKASYLNCLKLVDRNRFMDCNLFVDRALLDPSLCKDGIVNSLGFGKKMDSFGTFMHDYAEQNSIRHVDEDGIGKSNTCKDQPREPNEDDEVESGSQKGLIDSVTNRDKEDVAQRVNAALCREELTNGLEQKNRVHAMNLEKESERNTGTKSTNKIANSSSIPKRLLKSSSILKGGQKNDLHPKSQILKESLASNKFGNVPKNVDQCRNDQKLTARKQNRNENMAGIIATTTKVEKRAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHVNNERNMLERFGGKNYIIRYEGSLKNGNSDCFVLEHVDHDRPEVLKKEIDIVQLQWYGYCMFRALYCLHKEGVVHRDVKPGNFLYSRKLSKGYLIDFNLAMDLKQKHNVGSKSKPSLDASSNVISFSSGSAPLVRDKNLGGSKSLPSNKRALADYKNYSELNRNAKEKAYTVHLKNCPDKAGGSFLRAQGTDGSGITSAKDASTRTASAERLREPLPSHGRKELISLVNTMKCANSSTIGPSSQRKRVTAPSSKADDNIFYITPMPLHSSTVGGGLLRSKGDGKKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYLVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDRELSFPVELLNDRYLQSWDLEGWCKVHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHEFFDSVNESLRKKRMIHRHRALGSDDTAASRAI* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0986 983 MobiDBLite consensus disorder prediction 308 338 - -
Gso7g0986 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Gso7g0986 983 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 460 959 - -
Gso7g0986 983 Coils Coil 674 694 - -
Gso7g0986 983 Pfam Protein kinase domain 489 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0986 983 Pfam Protein kinase domain 811 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0986 983 PANTHER CASEIN KINASE-RELATED 460 959 - -
Gso7g0986 983 MobiDBLite consensus disorder prediction 308 350 - -
Gso7g0986 983 MobiDBLite consensus disorder prediction 715 738 - -
Gso7g0986 983 SMART serkin_6 487 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0986 983 Gene3D Transferase(Phosphotransferase) domain 1 447 642 - -
Gso7g0986 983 Gene3D Transferase(Phosphotransferase) domain 1 798 977 - -
Gso7g0986 983 ProSiteProfiles Protein kinase domain profile. 487 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0986 983 SUPERFAMILY Protein kinase-like (PK-like) 477 958 IPR011009 -
Gso7g0986 983 MobiDBLite consensus disorder prediction 716 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0986 Gso-Chr7 12655927 12663636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0986 801 958 Core Cell Cycle Gene Families AT1G76540 29.697 7.40e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Gso7g0986 Pkinase 5.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0986 K02214 - gmx:100795742 1960.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0986 7 12655927 12663636 Gso7g0986 7 12655927 12663636 ECH
Gso7g0986 7 12655927 12663636 Gso3g0932 3 33043400 33051151 GST