Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0976 ATGGATGGGCTGGAATTGCTGGAGAAGGAGTCCTGGGATTTGAACACTGAAGAGAAACTTAAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGTGTTGTTTAAAGCTGGTAAGCATGCAAGAGCTTCCAAAAGATATGAAAAGGTTGTGAAGTACATAGAATATGATTCCTTATTCGGTGAGGAGGAGAAAAAGCAGGCCAAGACCTTGAAGGTTTCCTGCAATCTTAACAATGCTGCTTGCAAGTTGAAGTTAAAAGACTACAAGGAAGCAGAAAAATTGTGTACCAAGGTGTTAGACATCGAGAGTACAAGTGTTAAAGCCCTCTATAGAAGGGCCCAAGCATATATGCAGTTAACTGACTTGGATTTGACTGAACTTGACATTAATAAAACTCTTGAAATTGACCCTAACAACAGAGGAGAAGCTGTTATTTGTTTTCAAGAAGCATAA 453 0.3907 MDGLELLEKESWDLNTEEKLKAAGKKKEEGNVLFKAGKHARASKRYEKVVKYIEYDSLFGEEEKKQAKTLKVSCNLNNAACKLKLKDYKEAEKLCTKVLDIESTSVKALYRRAQAYMQLTDLDLTELDINKTLEIDPNNRGEAVICFQEA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0976 150 PANTHER PEPTIDYLPROLYL ISOMERASE 6 140 - -
Gso7g0976 150 SUPERFAMILY TPR-like 12 139 IPR011990 GO:0005515
Gso7g0976 150 ProSiteProfiles TPR repeat profile. 106 139 IPR019734 GO:0005515
Gso7g0976 150 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 6 140 - -
Gso7g0976 150 Pfam Tetratricopeptide repeat 107 139 IPR019734 GO:0005515
Gso7g0976 150 Gene3D Tetratricopeptide repeat domain 9 148 IPR011990 GO:0005515
Gso7g0976 150 SMART tpr_5 72 105 IPR019734 GO:0005515
Gso7g0976 150 SMART tpr_5 23 56 IPR019734 GO:0005515
Gso7g0976 150 SMART tpr_5 106 139 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0976 Gso-Chr7 12379920 12389451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0976 8 140 Calmodulin-binding Proteins AT3G25230 77.444 1.99e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0976 K09571 - gsj:114418774 287.73