Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0970 | ATGAGCCCTCATGCTTTAAACACCAACGTGAATGCCCTTCATGACATTGGGCTCCCTGTATCGACACCATTTAAGGATGCTTCCGCGTCAGTGCCATCGACGGCAGTGTTTGGCCGGAACTCCAGCTTCCGGAACATTTTCTTGGCGGAGAACTGGGCAGAGCTTCCGTTGAAGGAGGATAACGCCGAAGACATGGTTATCTACGGTGTTCTGCGTGAGGCCGCCACCATGGGATGGCTCCCCGCCAATGGCAATGGGGTGAGCAAGGTAGGGATGGCTGTGAAAATGGAAAATGAGAGTCAAAATAGTGACAAAGCAGCTGCGTGTGGCACTCACGTGCCTCCAAGGAGGGGGTTGAGCTTCCGAGGCGTGCGGAGGAGGCCATGGGGAAAGTACGCGGCCGAGATAAGGGATGCTAAGAGGAATGGTGTGAGAGTGTGGCTTGGGACCTATGAGACTGCTGAAAATGCAGCTTTGGCTTATGATCGAGCCGCGTTTAAGATGCATGGCTCAAAAGCAAAGCTGAATTTTCCTCATTTAATTGCCTCGGCTCATCATCATGTCGAGCCAATTAGGATTTCCTTAAAGAAACATTCATTCGATGTTTCCTTGTCATCGTCGGAGGTGGCAGCAAAACGGAGTAAGAATGGCACTGCTTCCACAAATTTGGAGCTGAATGACTCAAATATGTTACAGTTTCCTATGGACAATAGGTGGCAATAA | 723 | 0.5021 | MSPHALNTNVNALHDIGLPVSTPFKDASASVPSTAVFGRNSSFRNIFLAENWAELPLKEDNAEDMVIYGVLREAATMGWLPANGNGVSKVGMAVKMENESQNSDKAAACGTHVPPRRGLSFRGVRRRPWGKYAAEIRDAKRNGVRVWLGTYETAENAALAYDRAAFKMHGSKAKLNFPHLIASAHHHVEPIRISLKKHSFDVSLSSSEVAAKRSKNGTASTNLELNDSNMLQFPMDNRWQ* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0970 | 240 | Pfam | AP2 domain | 121 | 170 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | PANTHER | DNA-BINDING DOMAIN | 22 | 214 | IPR044808 | GO:0003700|GO:0009873 | |
Gso7g0970 | 240 | SMART | rav1_2 | 120 | 184 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | CDD | AP2 | 121 | 180 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | SUPERFAMILY | DNA-binding domain | 121 | 179 | IPR016177 | GO:0003677 | |
Gso7g0970 | 240 | Gene3D | AP2/ERF domain | 120 | 179 | IPR036955 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | PRINTS | Ethylene responsive element binding protein signature | 121 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | PRINTS | Ethylene responsive element binding protein signature | 144 | 160 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | ProSiteProfiles | AP2/ERF domain profile. | 120 | 178 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0970 | 240 | PANTHER | BNAC04G53270D PROTEIN | 22 | 214 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0970 | Gso-Chr7 | 12024340 | 12025265 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0970 | 36 | 236 | AP2-EREBP Transcription Factor Family | AT2G44840 | 45.366 | 3.13e-59 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Gso7g0970 | AP2 | 6.3e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0970 | K09286 | - | gmx:100804762 | 479.944 |