Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0965 ATGTCTAATACCCTCACATCACATATAACACTAATACAACATTTCACTTTCCAAGTTCCAAAAGACCAAAGCCAAATGAACAATTTCAACACCACTCTTGAGTCCGATGATTTTGCTCTTCTAGAATCCATTCAACGTTACCTCCTCGACGACAACGAAGACTTCAACTCTATAACGGAGGTTTTGGCAACACCTAATAATAACGTCAATGCCGTTAACTCTCCATTATCTTCGTTGGGGCATGCAACAACGGCTGCTACAGAGGGGCGTGGGGCTTCGTCTGCAGAGGCGCGTGGTGGCCACGTGCGTAACCAAAATTACAAAGGAGTGAGACGCAGGCCTTGGGGCAAGTTTGCGGCTGAGATAAGGGACCCAAGTAGGAACGGCGCGAGAGTGTGGCTTGGGACTTACAATTCGGCTGAGGATGCAGCTTTGGCTTACGATCGAGCCGCTTTTGAAATGCGTGGCTCGAAAGCTAAGCTCAATTTTCCTCATTTAATTGGGTGCAGTGATGCTGAGCCGAGCCGAAGAAGTAATGGCTAA 543 0.477 MSNTLTSHITLIQHFTFQVPKDQSQMNNFNTTLESDDFALLESIQRYLLDDNEDFNSITEVLATPNNNVNAVNSPLSSLGHATTAATEGRGASSAEARGGHVRNQNYKGVRRRPWGKFAAEIRDPSRNGARVWLGTYNSAEDAALAYDRAAFEMRGSKAKLNFPHLIGCSDAEPSRRSNG* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0965 180 PANTHER DNA-BINDING DOMAIN 27 176 IPR044808 GO:0003700|GO:0009873
Gso7g0965 180 CDD AP2 105 166 IPR001471 GO:0003700|GO:0006355
Gso7g0965 180 ProSiteProfiles AP2/ERF domain profile. 106 164 IPR001471 GO:0003700|GO:0006355
Gso7g0965 180 SMART rav1_2 106 170 IPR001471 GO:0003700|GO:0006355
Gso7g0965 180 SUPERFAMILY DNA-binding domain 106 165 IPR016177 GO:0003677
Gso7g0965 180 Gene3D AP2/ERF domain 105 165 IPR036955 GO:0003700|GO:0006355
Gso7g0965 180 MobiDBLite consensus disorder prediction 80 105 - -
Gso7g0965 180 Pfam AP2 domain 106 156 IPR001471 GO:0003700|GO:0006355
Gso7g0965 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 27 176 - -
Gso7g0965 180 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Gso7g0965 180 PRINTS Ethylene responsive element binding protein signature 146 166 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0965 Gso-Chr7 11899199 11899958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0965 49 176 AP2-EREBP Transcription Factor Family AT2G44840 53.435 7.59e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso7g0965 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0965 K09286 - gmx:100806359 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0965 7 11899199 11899958 Gso7g0965 7 11899199 11899958 ECH
Gso7g0965 7 11899199 11899958 Gso3g0967 3 33851950 33852650 GST