Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0953 ATGCAAATCAAATTAAACAAGAGGAAACAGCAGTTGAAGAGGAGAAAAGCAAACAAAGCAAAGCAAAAACCCTGGCTTCAGTTCAGAGCAAAAAAAAAAAACATGTCCCTCCACCGCCATGTTTGCACAACCACCTCAAAGCTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATCCCTTGGAAGTACAAGAAGTTCGCGATAGCACAGGGCCAGAAGTCCCTCACTGACTACCTCCACGCTACTCGCTGCATCCCTTACGCCTACGCTGACAAAATCGCCAAGAACTCCCTCACATCCCTCACCACCCTCATCACCACTACTCTCGGTGGTTCCTTCTCCCCTCCCCACTTCCCCCACAACCTTAACAAGTTCCTCAGGTACCACCCCATCAACGAATTCGAGTTCTTCTTCGAGAGCATCGGCATTCATCCCTCCAAGCTCGGTTCTTTGCTGCCCCAAGACAATTTTTTTTTCTCAGAAGATGATACCCTTTTGAATGCTGCTCGTGTTCTCCATGAATTTGGGTTTCCCTGGGACAGGCTTGGGATTTTGTATGTGGAGAGTGGCTGCTTTTTCAAGTGCGGTGCTTCTGAGTTGAAGGGTAGGCTTTGTAGGTTCAAAAGGTATGGTTTTTGCAATGCGCAGGTTGTGGGGATATGTTTGGCTTTTCCCTTTGTGTTTGATGGCCAAAAGGGTGATGAGGTTGAGGCTTTGTTTTGTGATCTGGGATTGCTGTTTGGGGAGCTTGGTTTGGCTGAGTGTGTTGAGGGGAAGGGGAACAATAGTGTTGATGATTGGATTGGGGTGTGTAGGAAGATAAGGTTGTTTTATGATTTGAATGGTGGGAGGAGCTTAGTGGAACTCGTTGGAGGGAACAATGGTGTTGGTGTAGGTGTCATTTTGGAGCATGGGGAAGAGGAGTTGGTTCAAGCAACTGAGTATTTTTGTAGTTTTGGTGCGAAGAAGGAGGATGTGGCGCGGTTGATTGTAGATGGACGGGAGTTGTTGGAGCTTGATTTGAAGACACGGGTGGTTGATGTGGTGAAGCTGTTGAAATACTTTGGAATGAGCTCCGACGATGTTGAGGATGTTAGGAGGGATTATGCTCATGTGTTGGGGACAGTTAAGATGGGTAATCTGCCCAACGTGATGAGGGCTTTGGGTTTACATGAATGGTTCTTTGGTAAGATCAAGGATGGGAATCATTGGTTGTTAGTTAGTTTTGTTGCGAGCTATCCCAATGAAGTCCAGGATGAAGGCTATCTAGGTTGCTTGAAGGCGATTCAGGAGTCGAGAACCCCAACTCACAATATTAGCAAGTTGAATTTCTTGCACGCCATTGGCTTTGGCGAAAATGCTTTGACCATGAATGTGTATGCTCAGATGCATGGAACAAGTGTCGAGTTACAAAAGAGATTTGATTGCCTTCTACGTCTTGGGATTGAGTTTTCGAAGGTCTGTAAGATGATCACGATTTATCCTAAGATTCTTAGCCAAAACCCTCAAAATTTAGAGCAAAAGGTTAATTTCTTTTGTCAAGAAATGGGACACTCGCTGGAGCATTTGGTAACTTTTCCAGCATTCTTGTGCTTTGACTTAGAGAACCGCATTAAGCCTAGGTACAGGTTCCATATGTGGATTATGGAAAAGGGTCTGTCTTCCAAAAAATATTCCATTGCAAGCATGGTTGCGACAAGCAACAAGAATTTTGTTGCTCGTGCTTTTAAAATTCACCCAGCTGCTCTGAAACATTGGTTTGAGCAATTCTATCCAAGAAATTTGCAAGTGTGA 1797 0.453 MQIKLNKRKQQLKRRKANKAKQKPWLQFRAKKKNMSLHRHVCTTTSKLSAAAAAAAAAAIPWKYKKFAIAQGQKSLTDYLHATRCIPYAYADKIAKNSLTSLTTLITTTLGGSFSPPHFPHNLNKFLRYHPINEFEFFFESIGIHPSKLGSLLPQDNFFFSEDDTLLNAARVLHEFGFPWDRLGILYVESGCFFKCGASELKGRLCRFKRYGFCNAQVVGICLAFPFVFDGQKGDEVEALFCDLGLLFGELGLAECVEGKGNNSVDDWIGVCRKIRLFYDLNGGRSLVELVGGNNGVGVGVILEHGEEELVQATEYFCSFGAKKEDVARLIVDGRELLELDLKTRVVDVVKLLKYFGMSSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGLHEWFFGKIKDGNHWLLVSFVASYPNEVQDEGYLGCLKAIQESRTPTHNISKLNFLHAIGFGENALTMNVYAQMHGTSVELQKRFDCLLRLGIEFSKVCKMITIYPKILSQNPQNLEQKVNFFCQEMGHSLEHLVTFPAFLCFDLENRIKPRYRFHMWIMEKGLSSKKYSIASMVATSNKNFVARAFKIHPAALKHWFEQFYPRNLQV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0953 598 Pfam mTERF 440 572 IPR003690 GO:0003690|GO:0006355
Gso7g0953 598 MobiDBLite consensus disorder prediction 1 22 - -
Gso7g0953 598 SMART mt_12 489 520 IPR003690 GO:0003690|GO:0006355
Gso7g0953 598 SMART mt_12 521 555 IPR003690 GO:0003690|GO:0006355
Gso7g0953 598 SMART mt_12 328 359 IPR003690 GO:0003690|GO:0006355
Gso7g0953 598 Gene3D Transcription termination factor 3, mitochondrial 304 591 IPR038538 -
Gso7g0953 598 Gene3D Transcription termination factor 3, mitochondrial 116 254 IPR038538 -
Gso7g0953 598 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 53 591 - -
Gso7g0953 598 PANTHER CGI-12 PROTEIN-RELATED 53 591 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0953 Gso-Chr7 11677018 11685257 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso7g0953 mTERF 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0953 - - gsj:114418754 1153.27