Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0932 ATGTTGGACTATGAATGGGGGAACCCGTCCACGATAATGCTCACCGGAAATGAAGACAGCTCCGCCGCGGGCTCCGACCAAACCCACCGTCAAATCTTCGACCACTACGCGTCCCACACGCTCATCCCCGACCACTTCCTACACGCGCCAATGCACTCCACCGCCACCACTGCCGCGGCAACCACCGCGGATTTCACCCACCACCACTTCAACCCGCAACCCCACCACCATAACCACATGAACCACCACCACCATCACCACGCCTTCTTCGACCCACGCGCCTTCCATGGCGCGTCGAACACGTCCTACCCCCCACCCCCTTCCATGCTTTCCCTTGACCCACTGCCTCACGTCAACGCTGTTGGGTCTGGGCCTGGACACGGGCCCGGGCCAGGACCCGGGCCAGGCGGACTTCTCCTTGTCCCCAAGTCTGAAGAAGTCGGTCGGCCCATGGACTTTGTCGGCTCACGAATTGGACTCAATCTCGGAGGACGAACTTACTTCTCGTCCTCTGAGGATGACTTCGTGAGCCGGCTCTACCGTCGGTCTAGGCCCGTGGAACCGGGTTCGACTATCTCGTCGAACTCGCCGCGATGCCAGGCCGAGGGTTGCAATGCTGATCTGTCGCAAGCCAAGCACTATCACCGCCGCCACAAGGTGTGCGAGTTTCACTCCAAAGCCGCCACCGTCATCGCCGCCGGCTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTCTTTCTGAGTTTGATAACGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCATAATCGCCGCAGAAGAAAAACTCAACAACCAACTCAAGAAATTCAGAAATCTCAGCCTTCTTTGGATAATGTTGCAAGATCTCCACCGGACTCCGGAGCTCAGTCTTCATCGTCGGTGACGGTGGCAGTGTCGCCACCGGATTATTTCCGGCAGAGGCCATACCAAAGCACAAACAACCCTTCATCGATTTCAAGCTCACTGTTTTTCTCAAGCGGGTAG 1017 0.5723 MLDYEWGNPSTIMLTGNEDSSAAGSDQTHRQIFDHYASHTLIPDHFLHAPMHSTATTAAATTADFTHHHFNPQPHHHNHMNHHHHHHAFFDPRAFHGASNTSYPPPPSMLSLDPLPHVNAVGSGPGHGPGPGPGPGGLLLVPKSEEVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTISSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKSQPSLDNVARSPPDSGAQSSSSVTVAVSPPDYFRQRPYQSTNNPSSISSSLFFSSG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0932 338 Pfam SBP domain 199 272 IPR004333 GO:0003677
Gso7g0932 338 Gene3D - 189 260 IPR036893 GO:0003677|GO:0005634
Gso7g0932 338 ProSiteProfiles Zinc finger SBP-type profile. 196 273 IPR004333 GO:0003677
Gso7g0932 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 82 321 - -
Gso7g0932 338 MobiDBLite consensus disorder prediction 265 338 - -
Gso7g0932 338 SUPERFAMILY SBT domain 197 277 IPR036893 GO:0003677|GO:0005634
Gso7g0932 338 MobiDBLite consensus disorder prediction 277 338 - -
Gso7g0932 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 82 321 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0932 Gso-Chr7 11136865 11139920 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0932 1 246 SBP-box Gene Family AT1G02065 43.071 4.60e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gso7g0932 SBP 5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0932 - - gmx:100778566 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0932 7 11136865 11139920 Gso3g1009 3 34589722 34592672 GST