Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0922 ATGGGTTTTTCCACATTTTTACTCCCTCTTCTCGTTTCTCTAATTTTCCATAATTTTCAGCACTCATCTTCATTCTCCCTCTCCGTGGAGAAATTCAAAGAAGATGTAATAGTGTCATCACCAAAGGGCAAATTCACTGCTGGGTTTTACCCTGTAGGGGATAACGCATACTGCTTTGCCATATGGTACACACAACCACCTCACACCCTTGTTTGGATGGCCAACCGGGACCAGCCGGTCAACGGAAAACGCTCTACCCTTTCCCTTCTCACTACCGGTAACCTCGTACTAACCGATGCCGCTCAGTTCATGGTATGGTCCACAAACACCGCCACCTCATCCAAACAAGTCCAGTTACATTTCTACGATACCGGTAACCTCGTTCTCCTCGACAACTCCGACAACGTTGTTGTTCTGTGGCAAAGCTTCGATTACCCAACGGACACGCTTCTTCCTGATCAAACTCTCACCAAGAACTCCAACCTTATTTCCTCGAGAAGCGGAACCAACTATTCTTCTGGTTTCTACAAGCTCTTCTTCGACTCCGATAATGTTCTCCGCCTCATGTACCAAGGTCCACGTGTTTCAAGCGTTTACTGGCCAGACCCTTGGCTTCTTAACAATAATTTAGGTATTGGTGGTACGGGTAATGGTAGAACCTCTTACAACGATAGCAGGGTTGCTGTACTAGATGAGTTTGGCCACTTTGTTTCTTCGGATAACTTCACTTTCAAAACAAGTGATTATAGGACGGTGCTCCAACGTAGATTGACGCTTGATCCCGACGGTAGCGTGAGGGTGTACAGCAAGAACGATGGAGAAGACAAGTGGTCCATGTCAGGGGAATTCAAGTTACATCCCTGTTATGCTCATGGGATTTGTGGATCCAATAGTTATTGCAGATACGAGCCAACAACCGGTAGAAAGTGTTTGTGTCTTCCAGATCATACCTTGGTTGATAATCAAGACTGGTCTCAAGGTTGCACACCAAATTTCCAACATTTGTGCAACGACAACAACACCAAGTATGAGTCTCGCTTCCTGGGCATGTCCCTTGTTAGTTTCTATGGATACGACTATGGTTACTTTGCAAATTACACCTACAAACAATGTGAGAATCTGTGTTCGCGATTGTGCCAATGCAAAGGGTTTCTACACATATTTTCAGAGGAAAATGCTTTCTTTGAGTGCTACCCAAAGACGCAGTTACTAAATGGGAATAGACAAATGGATTTCAAGGGATCATTCTTCCTGCGACTGCCTTTGTCCCATGAAGAGTATGAGAACCCTGTCCAAAATAACGACAATGGCGGCTTGGTTTGTGGGGGAGAAGGTGGAGGAGCGAAACTACTGGAGAGACAGTACGCGGAAGAAAAAGAAAATGGATCGGTGAAGCTCATGTTGTGGTTTGCGAGTGCCTTGGGAGGAATTGAGGTTGTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAACAAAAATCGGAAATTACACTCCGGTGCTGACAAACAAGGCTATGTTATTGCAACAGCTGCAGGGTTTCGGAAATTCAGTTACTCTGAGCTGAAACAAGCCACCAAAGGCTTCAGTGAAGAGATTGGAAGGGGTGGTGGAGGTACTGTGTATAAGGGTGTCTTGTCTGATAATCGAGTTGTGGCAATAAAGCGACTGCATGAAGTAGCAAACCAAGGAGAAAGTGAGTTCCTAGCTGAAGTAAGGATAATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTTGGGGTATTGTGCAGAGGGTAAGCATAGGTTGTTGGTTTATGAGCACATGGAGAATGGTTCTTTAGCTCAAAACCTCTCATCGAGTTCAAATGTTCTTGATTGGAGTAAGAGATATAGCATTGCTCTTGGAACGGCAAAGGGTCTGGCCTACTTGCATGAAGAATGTCTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAAAATATACTTCTTGACTCTGATTACCAACCCAAGGTAGCGGATTTTGGCTTGTCTAAGCTACTTAACCGGAACAGCAACCTCAACAATTCAAGTTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAGCAGGTATCCAAATCACAGAATTAGAAGCAGCATCACATCATCATGAGAGGTTGGTGACATGGGTGAGGGACAAAAGGAGAACAAGATCAAAAATGGGATCATCATGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAAAAAACTATGACAGGAATGAAATGGAGATATTGGCAACGGTGGCTTTGGAATGTGTAGAGGATGAGAAAGATGCGAGACCTAGCATGAGTCAAGTTGCTGAGAGGCTCCAAAATCATGAACCCTATACGTGA 2460 0.4463 MGFSTFLLPLLVSLIFHNFQHSSSFSLSVEKFKEDVIVSSPKGKFTAGFYPVGDNAYCFAIWYTQPPHTLVWMANRDQPVNGKRSTLSLLTTGNLVLTDAAQFMVWSTNTATSSKQVQLHFYDTGNLVLLDNSDNVVVLWQSFDYPTDTLLPDQTLTKNSNLISSRSGTNYSSGFYKLFFDSDNVLRLMYQGPRVSSVYWPDPWLLNNNLGIGGTGNGRTSYNDSRVAVLDEFGHFVSSDNFTFKTSDYRTVLQRRLTLDPDGSVRVYSKNDGEDKWSMSGEFKLHPCYAHGICGSNSYCRYEPTTGRKCLCLPDHTLVDNQDWSQGCTPNFQHLCNDNNTKYESRFLGMSLVSFYGYDYGYFANYTYKQCENLCSRLCQCKGFLHIFSEENAFFECYPKTQLLNGNRQMDFKGSFFLRLPLSHEEYENPVQNNDNGGLVCGGEGGGAKLLERQYAEEKENGSVKLMLWFASALGGIEVVCIFLVWCFLFRNKNRKLHSGADKQGYVIATAAGFRKFSYSELKQATKGFSEEIGRGGGGTVYKGVLSDNRVVAIKRLHEVANQGESEFLAEVRIIGRLNHMNLIGMLGYCAEGKHRLLVYEHMENGSLAQNLSSSSNVLDWSKRYSIALGTAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRNSNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTAGIQITELEAASHHHERLVTWVRDKRRTRSKMGSSWVDQIVDPALGSKNYDRNEMEILATVALECVEDEKDARPSMSQVAERLQNHEPYT* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0922 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gso7g0922 819 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Gso7g0922 819 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Gso7g0922 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 201 IPR036426 -
Gso7g0922 819 Gene3D - 28 144 IPR036426 -
Gso7g0922 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Gso7g0922 819 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Gso7g0922 819 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 6 817 - -
Gso7g0922 819 Gene3D Transferase(Phosphotransferase) domain 1 603 818 - -
Gso7g0922 819 SMART blect_4 29 146 IPR001480 -
Gso7g0922 819 Pfam D-mannose binding lectin 69 161 IPR001480 -
Gso7g0922 819 Pfam Protein kinase domain 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0922 819 SMART serkin_6 527 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0922 819 Pfam S-locus glycoprotein domain 239 314 IPR000858 GO:0048544
Gso7g0922 819 SUPERFAMILY Protein kinase-like (PK-like) 510 812 IPR011009 -
Gso7g0922 819 ProSiteProfiles Protein kinase domain profile. 527 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0922 819 CDD STKc_IRAK 533 814 - -
Gso7g0922 819 CDD B_lectin 39 146 IPR001480 -
Gso7g0922 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0922 Gso-Chr7 10744649 10747877 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0922 517 819 Trihelix Transcription Factor Family AT5G38560 44.444 3.81e-69 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso7g0922 Pkinase 8.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0922 - - gmx:100784990 1611.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0922 7 10744649 10747877 Gso3g0031 3 283172 286569 GST