Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0920 ATGCGAATGGCTTCTTCCACATTTTTACTACCTCTTTTCGTTTCTCTAATTTTCCATAATTTTCAGCACTCATCTTCATTCTCCCTCTCCGTGGAGAAATTCAAAGAAGATGTAATAGTGTCATCACCAAAGGGCAAATTCACTGCAGGGTTTTACCCTGTAGGGGATAACGCATACTGCTTTGCCATATGGTACACACAACCACCTCACACCCTTGTTTGGATGGCCAACCGGGACCAGCCGGTCAACGGAAAACGCTCTACCCTTTCCCTTCTCACTACCGGTAACCTCGTACTAACCGATGCTGCTCAGTTCATGGTATGGTCCACAAACACCGCCACCTCATCTAAACAAGTCCAGTTACATTTCTACGACACCGGTAACCTCGTTCTCCTCGACAACTCCGACAACGTTGCTCTTCTGTGGCAAAGCTTCGATTTCCCAACGGACACGCTTCTTCCTAATCAACCTCTCCGCAAGAGCACCAACCTTATTTCCTCGAGAAGCGGGACCAACTATTCTTCTGGTTACTACAAACTCTTCTTCGACTTTGAGAATGTTCTCCGCCTTATGTACCAGGGCCCTCAAGTTTCAAGCGTTTACTGGCCATATGATTGGCTTCGGAGCAACAATATCGATTATGGTATTGGTAATGGTAGATACACTTTCAACGATAGTAGGGTGGTTGTGCTAGATGATTTCGGCTACTTGGTTTCTTCTGATAACTTCACTTCCAAAACAAGTGATTACGGGATGATAATCCAACGGAGATTAACACTCGATCACGACGGAAATGTTCGTGTGTATAGCATCAAAGACGGACAAGACAAGTGGTCGGTATCAGGAATATTTCGGCGACAACCTTGTTTTATTCATGGGATTTGTGGTCCTAGCAGTATTTGCAGTTATGAACCAGCAAGTGGAAGAAAGTGTTCGTGCCTTCCAGGGTATCGATGGCTTGATAGCGAAGACTGGTCTCAAGGTTGTGTACCGAAGTTCCAACTTTGGTGCCGCAACAACAACACTGAGCAAGATTCTCGCTTCCTGCAGTTACCCGAAGTGGATTTTTACGGATACGACTATGGCTTCTTTCTGAATCACACGTATCAACAATGTGTAAATCTGTGCTTGCGATTGTGCGAATGCAAAGGGTTTCAACACAGCTCTTCGGGGCAAGGCGGTGTTAATGGTCAGTGCTACCTCAAGACACAGTTGTTAAATGGCCATCGTACACCGGGTTATTCGAGATCATTCATCCTGCGACTGCCTTCGTCCATGCATGACTATGACGAGAACACCATCAATATTGGTTTGGTTTGTGGGGGAAACAGAGGAGTGCAAGTACTAGAGAGACCGTATGTGGAAGAGAAAGAAAATGGATCGGTCAAGCTCATGATGTGGTTTGCAAGTGCCTTGGGAGGAATTGAGGTCGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAAAAATAATGCTGATAAACAAATCTATGTTCTTGCAGCTGAAACGGGGTTTAGGAAATTCAGTTACTCTGAACTGAAACAAGCCACCAAAAACTTCAGTGAAGAGATTGGAAGGGGTGGTGGAGGTACTGTGTATAAGGGTGTCTTGTCTGATAATCGAGTAGCGGCAATAAAGAGACTGCATGAAGTAGCGAACCAAGGAGAAAGTGAGTTCCTGGCTGAAACAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTTGGGGTATTGTGCAGAGGGTAAGCATAGGTTGTTGGTTTATGACTACATGGAGAATGGTTCTTTAGCTCAAAACCTAGATTCAAGTTCGAATGTGCTTGACTGGAGTAAAAGGTATAACATTGCTCTAGGAACGGCAAGGGGTCTGGCCTACTTGCATGAAGAATGTCTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAAAATGTACTTCTTGATTCTGATTACCAACCCAAGGTAGCGGATTTTGGCTTGTCTAAGCTACTTAACCGGAACAGCAACCTCAACAATTCAAACTTCTCGAGGATAAGAGGAACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCCATCACTTCCAAGGTGGATGTCTACAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAACAGGTGTCCGAGTCACAGAATTAGAAGCAGAGTCGCATCATGACGAGAGGTTAGTGACTTGGGTGAGGGAGAAAAAGATGAAAGCATCAGAAGTGGGATCAACTTGGGTGGATCGAATCGTTGACCCTGCTTTGGGATCAAACTATGACATGAATCAAATGGAGATATTAGCAACGGTGGCTTTGGAATGTGTAGACGAAGACAAAGACGTGAGGCCCAGCATGAGTCAAGTTGCTGAGAGGCTCCAAAATCACGAAAATGATTCTTGA 2433 0.4484 MRMASSTFLLPLFVSLIFHNFQHSSSFSLSVEKFKEDVIVSSPKGKFTAGFYPVGDNAYCFAIWYTQPPHTLVWMANRDQPVNGKRSTLSLLTTGNLVLTDAAQFMVWSTNTATSSKQVQLHFYDTGNLVLLDNSDNVALLWQSFDFPTDTLLPNQPLRKSTNLISSRSGTNYSSGYYKLFFDFENVLRLMYQGPQVSSVYWPYDWLRSNNIDYGIGNGRYTFNDSRVVVLDDFGYLVSSDNFTSKTSDYGMIIQRRLTLDHDGNVRVYSIKDGQDKWSVSGIFRRQPCFIHGICGPSSICSYEPASGRKCSCLPGYRWLDSEDWSQGCVPKFQLWCRNNNTEQDSRFLQLPEVDFYGYDYGFFLNHTYQQCVNLCLRLCECKGFQHSSSGQGGVNGQCYLKTQLLNGHRTPGYSRSFILRLPSSMHDYDENTINIGLVCGGNRGVQVLERPYVEEKENGSVKLMMWFASALGGIEVVCIFMVWCFLFRKNNADKQIYVLAAETGFRKFSYSELKQATKNFSEEIGRGGGGTVYKGVLSDNRVAAIKRLHEVANQGESEFLAETSIIGRLNHMNLIGMLGYCAEGKHRLLVYDYMENGSLAQNLDSSSNVLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNVLLDSDYQPKVADFGLSKLLNRNSNLNNSNFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVRVTELEAESHHDERLVTWVREKKMKASEVGSTWVDRIVDPALGSNYDMNQMEILATVALECVDEDKDVRPSMSQVAERLQNHENDS* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0920 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 205 IPR036426 -
Gso7g0920 810 Pfam Protein kinase domain 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0920 810 SMART serkin_6 519 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0920 810 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Gso7g0920 810 Pfam S-locus glycoprotein domain 254 318 IPR000858 GO:0048544
Gso7g0920 810 ProSiteProfiles Protein kinase domain profile. 519 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0920 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Gso7g0920 810 Pfam D-mannose binding lectin 71 161 IPR001480 -
Gso7g0920 810 SUPERFAMILY Protein kinase-like (PK-like) 498 803 IPR011009 -
Gso7g0920 810 Gene3D - 30 147 IPR036426 -
Gso7g0920 810 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 7 810 - -
Gso7g0920 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Gso7g0920 810 CDD STKc_IRAK 525 805 - -
Gso7g0920 810 Gene3D Phosphorylase Kinase; domain 1 485 594 - -
Gso7g0920 810 CDD B_lectin 41 148 IPR001480 -
Gso7g0920 810 Gene3D Hepatocyte Growth Factor 349 417 - -
Gso7g0920 810 Gene3D Transferase(Phosphotransferase) domain 1 595 810 - -
Gso7g0920 810 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Gso7g0920 810 SMART blect_4 31 148 IPR001480 -
Gso7g0920 810 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Gso7g0920 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0920 Gso-Chr7 10728571 10731265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0920 509 808 Trihelix Transcription Factor Family AT5G38560 44.224 4.85e-71 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso7g0920 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0920 - - gmx:100786566 1643.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0920 7 10728571 10731265 Gso3g0028 3 259437 262512 GST