Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0905 ATGCCCCAGAATAAGATTTTCCAAGACCAACAACAATCATCGAATCCGATTCCTGATCTTTCCCTTCACATTAGCCTCCCAAACAGTGCTCCTTCTTCAATTTGCAGTGAAGGGGATTCACCCTTTGATGCTGAAGGCCTCAAATCACACAGTGATGGTTCAATCAAAGTAGAACCAATCTCAAGGTTTCGTGAGATGACCATGGAGAGTGCTCTAAGACCCCAACAAGTTCCGTACTTTGATTACCCACACCAGCAGCAGCATCAGTTTGGGAGTAGTAATATTGGAGCTTCTGATTTTTCGAATGGATTTGTGAGGTCGAGAATGTTTTCAAGGCAGCAAAGTAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGTTCTCTTCACAATCGCTTTCTTCATGCTGTTGAGCTACTTGGTGGCCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAGCTCATGGATGTCAAAGATCTAACACTAGCTCATGTCAAGAGTCATTTGCAGATGTATCGGACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGATGGGGATGAGGATTTCATGTCCCTAACAGTACCAAATGATCAAAATAAGAATTTTTTACCCAATCAGAGAGGAACTCCAAATGCATCTATAGATAATGATATGGGCTACACTTCCAGCAATCTATGGGTTAATTCTTCTTCCAGTAGAGGAGCACGGATTCAAGCTAATTCTCGAGATTTGGATGAGCTTAGTCCACAAGAAATCCTATCATCTCAGCATACTGGGAAACTTTCTGAGGGTAGCAACTACATACAAACAAGAAGCTTCGACATGGATCAAAATCCAAGCTTGGAGTTCACCTTAGGGAGATCAAATTGGCACAACAATGAACATGCCTAA 903 0.4241 MPQNKIFQDQQQSSNPIPDLSLHISLPNSAPSSICSEGDSPFDAEGLKSHSDGSIKVEPISRFREMTMESALRPQQVPYFDYPHQQQHQFGSSNIGASDFSNGFVRSRMFSRQQSNKRNMRAPRMRWTSSLHNRFLHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTVPNDQNKNFLPNQRGTPNASIDNDMGYTSSNLWVNSSSSRGARIQANSRDLDELSPQEILSSQHTGKLSEGSNYIQTRSFDMDQNPSLEFTLGRSNWHNNEHA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0905 300 SUPERFAMILY Homeodomain-like 120 177 IPR009057 -
Gso7g0905 300 MobiDBLite consensus disorder prediction 31 55 - -
Gso7g0905 300 Gene3D - 122 179 - -
Gso7g0905 300 MobiDBLite consensus disorder prediction 1 20 - -
Gso7g0905 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 123 176 IPR006447 GO:0003677
Gso7g0905 300 MobiDBLite consensus disorder prediction 200 220 - -
Gso7g0905 300 Pfam Myb-like DNA-binding domain 124 175 IPR001005 -
Gso7g0905 300 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 57 300 - -
Gso7g0905 300 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 56 - -
Gso7g0905 300 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 57 300 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso7g0905 300 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 56 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0905 Gso-Chr7 10462709 10472237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0905 103 295 G2-like Transcription Factor Family AT5G16560 49.505 3.14e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso7g0905 Myb_DNA-binding 5.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0905 - - gmx:100796973 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0905 7 10462709 10472237 Gso9g1407 9 38083829 38087800 GST