Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0894 ATGGCCCTCGTCCGCCACCGCCGCCACCCCAACCTCCGTCTCCCCCTCCCGGAGCCCTCCGAGCGCCGCCTCCGCTTCCCCCTCCCCCTCCCTCCCACCACCACCGCCAAACCAGCCTCCGGCGACGCCATTGCCGCCGCCGACCTCGAGAAGCTCGCCATCCTTGGCCACGGAAACGGCGGCACCGTCTACAAAGTCCGCCACAAGGCCACCTCCGCCACCTACGCGCTCAAGATCATCCACTCCGACACCGACGCCACCAGGCGCCGCCGCGCCCTCTCGGAAACCTCCATCCTCCGCCGCGTTACCGACTGCCCCCACGTTGTCCGCTTCCACAGCTCCTTCGAAAAGCCCTCCGGTGACGTGGCGATCCTCATGGAGTACATGGACGGCGGCACCCTCGAGACCGCCCTCGCCGCCAGCGGCACGTTCTCGGAAGAGCGACTCGCCAAGGTGGCGCGTGACGTCCTCGAGGGGCTCGCGTACCTCCACGCGCGCAACATCGCTCACCGCGACATAAAGCCCGCGAACATCCTAGTAAACTCCGAAGGGGATGTTAAGATTGCAGACTTCGGAGTCAGCAAACTCATGTGCCGCTCGCTCGAAGCGTGTAACTCTTATGTCGGCACGTGCGCGTACATGAGTCCCGACCGGTTCGACCCGGAAGCGTATGGCGGGAACTATAACGGTTTTGCTGCGGATATTTGGAGTTTGGGTTTGACCCTATTTGAACTCTATGTGGGTCACTTCCCATTTCTTCAAGCGGGTCAGAGACCCGACTGGGCTACCCTTATGTGTGCAATTTGCTTCGGCGACCCGCCGAGCCTCCCCGAGACCGCGTCACCGGAGTTTCGCGATTTCGTGGAGTGCTGCCTCAAGAAGGAGTCCGGGGAAAGGTGGACGACGGCTCAGCTCTTGACCCACCCGTTTGTGTGCAATGACCCGGATACATGTTAA 957 0.628 MALVRHRRHPNLRLPLPEPSERRLRFPLPLPPTTTAKPASGDAIAAADLEKLAILGHGNGGTVYKVRHKATSATYALKIIHSDTDATRRRRALSETSILRRVTDCPHVVRFHSSFEKPSGDVAILMEYMDGGTLETALAASGTFSEERLAKVARDVLEGLAYLHARNIAHRDIKPANILVNSEGDVKIADFGVSKLMCRSLEACNSYVGTCAYMSPDRFDPEAYGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWATLMCAICFGDPPSLPETASPEFRDFVECCLKKESGERWTTAQLLTHPFVCNDPDTC* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0894 318 Gene3D Transferase(Phosphotransferase) domain 1 131 317 - -
Gso7g0894 318 Pfam Protein kinase domain 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0894 318 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 313 - -
Gso7g0894 318 SUPERFAMILY Protein kinase-like (PK-like) 48 314 IPR011009 -
Gso7g0894 318 Gene3D Phosphorylase Kinase; domain 1 32 130 - -
Gso7g0894 318 CDD PKc_MAPKK_plant_like 47 311 - -
Gso7g0894 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Gso7g0894 318 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 2 313 - -
Gso7g0894 318 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Gso7g0894 318 SMART serkin_6 49 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0894 318 ProSiteProfiles Protein kinase domain profile. 49 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0894 Gso-Chr7 10306775 10308070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0894 1 314 MAP Kinase Kinase Gene Family AT1G73500 60.635 4.42e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gso7g0894 Pkinase 2.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0894 K20604 - gmx:100778369 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0894 7 10306775 10308070 Gso9g1416 9 38195642 38196872 GST