Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0880 ATGTGTTGCAGAAACCGCTTCATCGCCTGCACCTGCTGCATAATCATCACCCTCTTCTTCATGTTCATAATTTCCATCATCGTCTGCATCTCACCCTCAAGTGTCAAGTTCCATGTAACCGATGCCTCCCTAACACAATTCAACCTCACAAGCAACAACACTTTGTATTACAACTTGAAGGTCAACGTCACAGTGAGAAACCCCAACAAGCACACCATAGTGTACTATAGGAGGATCACAGTAATTTCTTGGTACAAAGATAATGCTTTTGGTTGGGTGAGCTTAACACCCTTTGACCAAGGCCACAAGAACACAACCTTCCTTCAAGCAGTGTTTGAAGGGCAGAGGGTGATTAAGCTCAAATCTAAACAACTTGGTGAGTATAAAGATGAGACAAGTGTTGGGATTTACAAGGACCTTGCTGTGGATTTTGATCTTAGAATCAGAGCCAAGTATGGAAAGTTCAAGAGTAGTCGTTTCAATACACCCATTGTTCAGTGTCGCCGATTGAGGGTTCCTTTGATTTCTAATGGTAAATCAGTACCTCCTTTTAGTGTCACCAGATGCAAAAGTGCTTCTTTCTTCTCAGATCGTGATGCGCCTGATGTTGATGGATAG 618 0.4272 MCCRNRFIACTCCIIITLFFMFIISIIVCISPSSVKFHVTDASLTQFNLTSNNTLYYNLKVNVTVRNPNKHTIVYYRRITVISWYKDNAFGWVSLTPFDQGHKNTTFLQAVFEGQRVIKLKSKQLGEYKDETSVGIYKDLAVDFDLRIRAKYGKFKSSRFNTPIVQCRRLRVPLISNGKSVPPFSVTRCKSASFFSDRDAPDVDG* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0880 205 Pfam Late embryogenesis abundant protein 62 156 IPR004864 -
Gso7g0880 205 PANTHER HARPIN-INDUCED 1 17 195 - -
Gso7g0880 205 PANTHER OS05G0367900 PROTEIN 17 195 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0880 Gso-Chr7 10058857 10059931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0880 29 174 SNARE and Associated Proteins AT1G32270 32.653 1.91e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0880 - - gmx:100780503 400.208