Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0879 ATGCCACTGATTCACACTACTCCACCGCTTCACTATGCCATTTCCACACTTATCAATGCACCATCATCATCTTCTTCCACCCTCTCTGCTGCCACATTCGGTTCCAATTTTCTGCGCAAAATCCATAACCCAATTTTTAGGTTTTCCACCGCCAGAAATCGCTCGCGCGCTGCAGTGGTCAGAGCCAAAGCAGGGACCGATTACTATTCCACCTTGAACGTTGGCCCCAATGCCACGCTGCAAGAAATCAAGGCCTCCTATCGTAAACTGGCGCGAAAGTACCATCCAGATATGAACAAAAGCCCTGGGGCTGAGGATAAGTTCAAGGAAATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGATAATGGAGGGTCGACTGGTGCTCCAGGGGTTGATCCTTTTGATTTATTCGATACATTCTTTGGTCGTTCTGATGGAGTATTTGGAGTTGGTGATGAAGGGAGCTTCAACTTCAATTTTAGAAACAAGAGAAACCATGTTCATGATATTCGATATGACCTTCATTTGAGCTTTGAAGAATCAATATTTGGAGGACAGAGGGAGATCGAAGTTTCCTGTTTTCAGACATGTAATATGTGTGATGGTACAGGAGCTAAATCAAAGAATTGCATTAAACAATGCACAAATTGTGGTGGCAGAGGGGGAGAAATGAAAACTCAGAGAACACCCTTTGGAATGATGTCTCAGGTTTCTACCTGCTCTAAGTGTGGTGGCCTTGGCAAAATAATCACCGATCAATGTCGAAGGTGTGATGGCAGTGGTCAGGTGCAATCTAAACAAACAATGGAAGTAGAAATTCCTCCTGGAGTCAATGATGGAGACACAATGCAAATTCAAGGACAAGGAAATTTTGATAAAAAGAGGCAAATTACTGGGGATCTTTATGTTGTCCTGCATGTAGATGAAAAGCAGGGAATTTGGAGAGAGGGTCTTCATTTGTACTCAAAGATTAGCATTGACTTCACGGATGCAATACTGGGGTCAGTTAAAAAGGTAGACACTGTTGAAGGTTTACGGGATCTTCAAATTCCTTCAGGGATTCAACCTGGAGATTCAGTGAAGTTGTCATGTTTGGGAGTTCCAGACATAAATAAACCATCTGTTCGAGGCGATCATTATTTCATTGTGAATGTTCTTATTCCCAAGGATATCAGTGGCACCGAACGTGTACTTGTTGAGCAGTTAGCTTCACTAAGAGCATCTAGCAAAAGGGATTCACTGTCTTCTAATGACAATGGGATACCCAAAGGAAAATTCAATGAATTCATAAAAAGGGATCCAAAAGGTGACGCTTCAAGGAAGGGAATAAAAAATGTTGGCTCTCTATGGGGATCAATCAAGAACTTCTTAAGGGGAGGACAGTCTGAAGAAAGGTTTGCCTCAATCAGCATGGATACGAAAGTATTCTTATGGAGATCTGGCCACCAAAATCCTGTCCCTGATTACTTTTTTGTTGTTTTCATTATAACTTGGATTTTTGCCTCTATAGCAAAGTCTAAGCATTAG 1578 0.4195 MPLIHTTPPLHYAISTLINAPSSSSSTLSAATFGSNFLRKIHNPIFRFSTARNRSRAAVVRAKAGTDYYSTLNVGPNATLQEIKASYRKLARKYHPDMNKSPGAEDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGDNGGSTGAPGVDPFDLFDTFFGRSDGVFGVGDEGSFNFNFRNKRNHVHDIRYDLHLSFEESIFGGQREIEVSCFQTCNMCDGTGAKSKNCIKQCTNCGGRGGEMKTQRTPFGMMSQVSTCSKCGGLGKIITDQCRRCDGSGQVQSKQTMEVEIPPGVNDGDTMQIQGQGNFDKKRQITGDLYVVLHVDEKQGIWREGLHLYSKISIDFTDAILGSVKKVDTVEGLRDLQIPSGIQPGDSVKLSCLGVPDINKPSVRGDHYFIVNVLIPKDISGTERVLVEQLASLRASSKRDSLSSNDNGIPKGKFNEFIKRDPKGDASRKGIKNVGSLWGSIKNFLRGGQSEERFASISMDTKVFLWRSGHQNPVPDYFFVVFIITWIFASIAKSKH* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0879 525 Gene3D DnaJ domain 64 166 IPR036869 -
Gso7g0879 525 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 324 IPR008971 GO:0006457|GO:0051082
Gso7g0879 525 Pfam DnaJ central domain 214 278 IPR001305 GO:0031072|GO:0051082
Gso7g0879 525 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso7g0879 525 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso7g0879 525 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso7g0879 525 PRINTS DnaJ domain signature 123 142 IPR001623 -
Gso7g0879 525 ProSiteProfiles Zinc finger CR-type profile. 201 283 IPR001305 GO:0031072|GO:0051082
Gso7g0879 525 CDD DnaJ 67 120 IPR001623 -
Gso7g0879 525 PANTHER EXPRESSED PROTEIN 71 428 - -
Gso7g0879 525 SUPERFAMILY Chaperone J-domain 64 171 IPR036869 -
Gso7g0879 525 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gso7g0879 525 SMART dnaj_3 66 123 IPR001623 -
Gso7g0879 525 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Gso7g0879 525 Gene3D - 331 422 - -
Gso7g0879 525 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 71 428 - -
Gso7g0879 525 Pfam DnaJ domain 67 128 IPR001623 -
Gso7g0879 525 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 412 IPR008971 GO:0006457|GO:0051082
Gso7g0879 525 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 201 281 IPR036410 -
Gso7g0879 525 Hamap Chaperone protein DnaJ [dnaJ]. 64 463 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gso7g0879 525 Pfam DnaJ C terminal domain 187 405 IPR002939 -
Gso7g0879 525 Gene3D - 214 278 - -
Gso7g0879 525 Gene3D - 185 320 - -
Gso7g0879 525 CDD DnaJ_C 186 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0879 Gso-Chr7 10034365 10040803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0879 68 128 C2H2 Transcription Factor Family AT1G74250 40.299 1.29e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0879 K03686 - gmx:100782135 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0879 7 10034365 10040803 Gso7g0879 7 10034365 10040803 ECH