Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0878 ATGCAACAACATTCTCAGACCCTCTTCGCCACCTTCACCATAATCTTCTTTGCCTTCTTCTTCCCTTCAACATTCTCCGACATCTCATCGGAGCGCGCGGCGCTGCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACCCTCCTCTGGAACGCCACCGCCCCCTCGCCGTGCGCCTGGCCCGGCGTCCAATGCGACGTCGCTAACGCCAGCGTCGTCGAGCTCCACCTCCCCGCCGTCGCACTCTCCGGCGAGCTCCCCGCCGGCGTGTTCCCGGCGCTCAAGAACCTCCACACGCTCAGCCTCCGCGTGAACTCCCTCTCCGGCACCCTCCCCGCCGACCTCTCCGCCTGCACCGCCCTCCGCAACCTCTTCCTCCAGCAGAACCACTTCTCCGGCGAGGTTCCGGCGTTCCTTTCCGGCATGACCGGCCTCGTCCGCCTCAATTTGGCCTCCAACAACTTTTCCGGTCCAATTCCGGCCCGGTTCGGGAACCTCACGCGGTTGAGGACCCTCTTCCTTGAGAACAACCGGTTCAACGGTTCGCTTCCAAGTTTTGAAGAACTCAATGAATTAGCTCAGTTCAATGTCTCTTACAACATGTTAAACGGTACTGTGCCCAAAAAGTTGCAAACTTTTGATGAAGATTCGTTTTTGGGGAATACCCTTTGTGGGAAACCTCTAGCAATTTGTCCCTGGGATGATGGGGGTGGTGAGAGTGGTGTAAATGGGAGTTCAAATTCAAGTGGGGTTGGAGGGGGTGAAGGGAGTGTGATTGGAGGGGAGAAGAAGAAGAAGGGAAAGCTTTCTGGGGGTGCAATTGCTGGGATTGTTGTTGGGAGTGTGGTGATTCTTTTGTTGGTTGTCTTTGCTTTGATTCTCTTGTGTAGAAGTGGGGACAAGACTAGGAGTGTTGATAATGTTAATAACATTGTGGGGTTGAAGGAGGAGCAGCAACTGCATGGAGAGGTAGGAATTGAGAGAGGCAATGTGGAGAATGGTGGTGGAGGGGGAGGTGGGAATTCGGTGGTGGCGGCAGCAACAGCGGTGGCAGCAGTGAGTGGCAGCAGGGGTGGTGGTGGTGGTGGTGGAGGAAGAGGAGATAAGAAGTTGGTGTTTTATGGTAATAAAGTGAAGGTGTTTGATTTGGAGGATTTGCTGAGGGCTTCTGCTGAGGTGTTGGGGAAAGGAACTTTTGGGACTACCTATAAGGCGGTTATGGAGGATGGGCCCGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACTGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGTGGTGGGAGTGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTACTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCATTGAATTGGGAAATGAGATCAAGCATTGCACTAGGAGCTGCTCGCGGCATCGAGTACCTACATTCACAAGGGCCTAGTGTTTCTCATGGAAACATAAAGTCCTCCAACATCCTCCTAACCAAGTCCTATGATGCTAGGGTATCTGATTTTGGCCTCACACACCTTGTTGGCTCTTCATCCACGCCCAACAGGGTTGCCGGTTACCGTGCTCCCGAAGTAACCGATCCGCGCAAAGTTTCTCAGAAGGCTGATGTATACAGCTTTGGGGTGTTGCTCTTGGAACTTCTCACAGGAAAGGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAACTCCTTAGGTATCAGAATTCAGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGCCCTTCAATGTCTCAAGTGAGACAACGCATAGAAGAGTTACGTAGGCCTAGCATGAAAGAGGGTACTCAAGACCAAATCCAACAACCTGATTTGATCAATGATATAGATGATGTGTCTTCTAGATGA 2055 0.5182 MQQHSQTLFATFTIIFFAFFFPSTFSDISSERAALLALRSAVRGRTLLWNATAPSPCAWPGVQCDVANASVVELHLPAVALSGELPAGVFPALKNLHTLSLRVNSLSGTLPADLSACTALRNLFLQQNHFSGEVPAFLSGMTGLVRLNLASNNFSGPIPARFGNLTRLRTLFLENNRFNGSLPSFEELNELAQFNVSYNMLNGTVPKKLQTFDEDSFLGNTLCGKPLAICPWDDGGGESGVNGSSNSSGVGGGEGSVIGGEKKKKGKLSGGAIAGIVVGSVVILLLVVFALILLCRSGDKTRSVDNVNNIVGLKEEQQLHGEVGIERGNVENGGGGGGGNSVVAAATAVAAVSGSRGGGGGGGGRGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVMEDGPVVAVKRLKDVTVSEKEFKEKIDVVGVMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSSIALGAARGIEYLHSQGPSVSHGNIKSSNILLTKSYDARVSDFGLTHLVGSSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSMSQVRQRIEELRRPSMKEGTQDQIQQPDLINDIDDVSSR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0878 684 CDD STKc_IRAK 393 656 - -
Gso7g0878 684 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 684 - -
Gso7g0878 684 ProSiteProfiles Protein kinase domain profile. 387 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0878 684 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Gso7g0878 684 Gene3D Phosphorylase Kinase; domain 1 366 461 - -
Gso7g0878 684 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
Gso7g0878 684 MobiDBLite consensus disorder prediction 663 684 - -
Gso7g0878 684 Pfam Protein kinase domain 390 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0878 684 PANTHER OS05G0588300 PROTEIN 1 684 - -
Gso7g0878 684 MobiDBLite consensus disorder prediction 656 684 - -
Gso7g0878 684 Gene3D Transferase(Phosphotransferase) domain 1 462 680 - -
Gso7g0878 684 Gene3D Ribonuclease Inhibitor 184 231 IPR032675 -
Gso7g0878 684 SUPERFAMILY Protein kinase-like (PK-like) 391 653 IPR011009 -
Gso7g0878 684 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Gso7g0878 684 SUPERFAMILY L domain-like 49 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0878 Gso-Chr7 10019317 10022526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0878 27 673 Receptor kinase-like Gene Family AT1G48480 58.129 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso7g0878 Pkinase 4.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0878 - - gmx:100781597 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0878 7 10019317 10022526 Gso9g1427 9 38334336 38337548 GST
Gso5g2107 5 44005957 44008642 Gso7g0878 7 10019317 10022526 PCT
Gso8g0468 8 4318309 4321298 Gso7g0878 7 10019317 10022526 PCT
Gso7g0878 7 10019317 10022526 Gso5g2107 5 44005957 44008642 PCT
Gso7g0878 7 10019317 10022526 Gso8g0468 8 4318309 4321298 PCT