Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0877 ATGGTCTTCAAGGGAAGATTCTTCTCTTCCAAGAAATCCGATTCTTCTAGCCCCGATGCATCCTCCAATAGTCCTCGATCTTTCTCCTCCAATTCTCCTTCCAGATCCGACAAGAAAAAATCTAAATCCGCCGCTAGTCAAACCCTAGTCGCCGCTGCCGCCGGCGGCAGCGGCGGCGGCGGTCTCGCTTCGTGCCGGCAGACGCAGGTCAAGGATGGAACCAAGAAGAAGGATACGGTCAAGGGGAAGGAAAGTCAAACGCCGCCGCCGGAGTCTCGGAAGGATTCTCCGGCGAAGAAGCTGACGGCGGCGGAGGGACGGGAATCGCCGTCGTCGTCATCGGTGTCTCCGATTCTGGCGTCGTCGCTGGGGCTTAACAGGATCAAGACGAGATCGGGGCCGCTGCCGCAGGAGAGCTTCTTCGGATTCAGGGGCGAGAAAGGGACGGCGGCGCTCGGCGGCAGCAACCTCTCGCGGCCGGGTGTTAGTGCCCGCGCCGGCGATGGGAAGAAGAAGGAGGTGGCTAGCCAGAGCAGGGTGGGATTTCACGAGGGTTCCGTCGGCAGTGCCGCCGCCGGAGGTTGGGGCGATAACGGGGGCAATTCCGATAATGTGTCAACGTCGGGGAGCTTGCCATCGAGGGAGCAGAGTCCGGTGGTGTTGCCGCGGTCGCGGTTGCAGAATGGAGAGTCATCATCGGAAGCTGCAGGCAAACAGGTATCATCACGGGCTCAGTCTGGAGGCTTAAAAAGTGCAGATGTTTGTACTCCAGAGACAGCATATGATTTTGAAAACCCTAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACTAGTGCACCCAGAAAGAGGTTTCCTTCGGACATCAAAAGTTTTTCCCACGAATTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTCGAAGCCTCGACGGTTAAATAACCTTGAGGAGATTTTGGTTGTTATTAGGGCAAAATTTGATAAAGCAAAGGAAGATGTGAACTCTGATCTGGCTATTTTTGCGGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAAACCATTGAGGACTTGCTAGTTTTGGCCAGGAGCTGTGCTATGACTTCATCTGGTGAGTTTTGGCTTCAGTGTGAAAGTATAGTTCAGGAGTTGGATGACAGGCGTCAAGAACATCCTCCAGGGATGTTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCATAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTCCGTCAATCCAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATACTAAAAGTTCAAGTGCTACAAAGGTCTTAAAGCCTTCATCGAAAAAAGCTTTTAGTCAAGAGCAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCAGAAAATCTATCTATTCCTGCTGATGATGACAATGCAAAACACTTTAACTCTTCTTCAGGCAGGAATCGAATGGCTTCTTGGAAGAAATTCCCTTCTCCAACAGGAAGAAGCCCTAAAGAAGCTGTTCAGTTGAAGGACCAAAATTATGGGAGGATTGAGTCTTCAAAGGCATCAAATAATAAGAGATTCAGTTCTGATGTGGATACTGCTAAGCCATCTGAGCTTCATCCTGTCAAAGATTCCTTGGATCATGCTTCCAAACACCAGCACAAAGTTTCCTGGGGACACTGGGGAGATCAGCAGAATAATAATAGTGAGGAGAATTCAATAATTTGTCGTATATGTGAAGAGGATGTTCCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCACTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTCAATGAGCGTCTTGGCAGAATTGCTGAAACACTAGAAAAGATGATGGAATCATGTACACAAAAGGATACCCAACAAATGGTGGGAAGTCCCGATGTTGCAAAAGTGTCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCACCTAAACTTAGTGATTGGTCTCGCAGAGGCTCGGAGGACATGCTAGACTGTTTCCCTGAAGCCGACAATTCTGTTTTTATGGATGACCTAAAAGGATTACCACTTATGTCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCCAGGTCTCCGTTGATGACACCACGGACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCGCAGATGAATGAACTTGCTGACATAGCGCGCTGTGTGGCAAATGCTCCTTTGGACGATGATCGCACGACGTCATATTTATTATCTTGTCTTGATGATTTGCGGGTTGTTGTAGATAGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACGCGTATTGAGAAGCTGATTCGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTGGAAAAGATAGATACAGAGAGCACTGTTGATGATGATCTATTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGATCGTACCTCCATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGGAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAACCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGTGAGAACTTATATCTTGTCATGGAATATCTTAATGGAGGTGACCTGTATTCACTATTAAGGAATTTAGGTTGCCTAGATGAGGAAGTCGCCCGTGTATATATTGCTGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCTCTGCATGTGGTTCATCGTGACTTGAAGCCTGACAATTTGTTGATAGCACATGATGGTCATATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGTCCAGCTGTGAATGGGACATCACTACTGGAAGAAGATGAAACTGATGTATTTACATCCGAGGATCAAAGGGAAAGGAGGAAGAAACGTTCTGCAGTGGGTACACCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGGGTTTACTGCTGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCACCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCAGCAGTTCCTGAAGAGATGAGTCCTCAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGATCCAAAGGGGCGTCAGAGGTAAAGCAACATGTTTTCTTCAAGGACATAAACTGGGATACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCGTGGAATACTTCTGATGGTCTTGTATATCCAGCAAGTGATGATGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGTTTGAGCAATCGACAAGATGAAGTGGGAGATGAATGTTGGGGTCTTACCGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGACCCGCCAACGAATTCTAGTGCATAG 3894 0.4563 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKSKSAASQTLVAAAAGGSGGGGLASCRQTQVKDGTKKKDTVKGKESQTPPPESRKDSPAKKLTAAEGRESPSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTAALGGSNLSRPGVSARAGDGKKKEVASQSRVGFHEGSVGSAAAGGWGDNGGNSDNVSTSGSLPSREQSPVVLPRSRLQNGESSSEAAGKQVSSRAQSGGLKSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFSKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDTKSSSATKVLKPSSKKAFSQEQSMMGWKKDVMQPENLSIPADDDNAKHFNSSSGRNRMASWKKFPSPTGRSPKEAVQLKDQNYGRIESSKASNNKRFSSDVDTAKPSELHPVKDSLDHASKHQHKVSWGHWGDQQNNNSEENSIICRICEEDVPTSHVEDHSRICALADRCDQKGLSVNERLGRIAETLEKMMESCTQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPEADNSVFMDDLKGLPLMSCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGFTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPQAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDDEDSSDADSLSGSSSCLSNRQDEVGDECWGLTEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA* 1298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0877 1297 MobiDBLite consensus disorder prediction 70 102 - -
Gso7g0877 1297 SUPERFAMILY Protein kinase-like (PK-like) 883 1213 IPR011009 -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 506 520 - -
Gso7g0877 1297 Pfam Protein kinase domain 886 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0877 1297 MobiDBLite consensus disorder prediction 459 482 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 497 573 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 106 128 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 9 32 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 659 696 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 543 561 - -
Gso7g0877 1297 SMART serkin_6 886 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0877 1297 ProSiteProfiles AGC-kinase C-terminal domain profile. 1176 1280 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso7g0877 1297 Gene3D Phosphorylase Kinase; domain 1 884 1204 - -
Gso7g0877 1297 ProSiteProfiles Protein kinase domain profile. 886 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0877 1297 MobiDBLite consensus disorder prediction 729 753 - -
Gso7g0877 1297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1005 1017 IPR008271 GO:0004672|GO:0006468
Gso7g0877 1297 CDD STKc_MAST_like 892 1180 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 199 249 - -
Gso7g0877 1297 Gene3D Transferase(Phosphotransferase) domain 1 970 1193 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 659 687 - -
Gso7g0877 1297 Coils Coil 315 335 - -
Gso7g0877 1297 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 29 1295 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 1 252 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 1218 1242 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 731 753 - -
Gso7g0877 1297 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 1295 - -
Gso7g0877 1297 MobiDBLite consensus disorder prediction 452 485 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso7g0877 Gso-Chr7 10003012 10015640 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0877 1 1291 AGC Kinase Gene Family AT3G17850 65.760 0.0 1613
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Gso7g0877 Pkinase 2.8e-65 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0877 7 10003012 10015640 Gso9g1428 9 38342337 38354619 GST